Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., pseudouridine synthase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  112 bits (279), Expect = 1e-29
 Identities = 72/241 (29%), Positives = 128/241 (53%), Gaps = 19/241 (7%)

Query: 4   KLQKVLARAGHGSRRELEALIRAGRVSVNGKVAVLGERLEDDNAVVRIDGHVVSVKAQEE 63
           ++ K L+  G+ SRR  + L+  G +++NGKV  LG ++   + V R++G +VS   ++ 
Sbjct: 7   RINKYLSEIGYCSRRAADKLLEEGCITINGKVPELGTKVSPGDDV-RVNGKLVSPPKEDF 65

Query: 64  VICRVLAYYKPEGELCTRHDPEGRRTVFDRL--PKIRGSRWISVGRLDANTSGLLLFTTD 121
           +    +A++KP G +CT      +  + D +  PK    R   +GRLD  + GL+  T D
Sbjct: 66  IY---IAFHKPVGIVCTTDTKREKDNIIDYINHPK----RIFPIGRLDKPSEGLIFLTND 118

Query: 122 GELANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYAGGEGINH 181
           G++ N+++      E+EY+V V   +T   +  +  GV + D + R   V   G      
Sbjct: 119 GDIVNKILRARNNHEKEYVVTVDKPITPNFIHKMANGVPILDTVTRKCKVEQIG----KR 174

Query: 182 TFYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWMEL---DLKQVNY 238
            F +V+ +G NR++RR+ +     V++LKR+R  ++ LD  +P G W  L   +L ++N 
Sbjct: 175 KFKIVLTQGLNRQIRRMCQYLDYEVTKLKRIRIMNVQLD--MPVGKWRYLTPAELAEINA 232

Query: 239 L 239
           L
Sbjct: 233 L 233