Pairwise Alignments

Query, 321 a.a., 23S rRNA pseudouridylate synthase B from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., pseudouridine synthase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  121 bits (304), Expect = 2e-32
 Identities = 85/238 (35%), Positives = 123/238 (51%), Gaps = 10/238 (4%)

Query: 4   KLQKVLARAGHGSRRELEALIRAGRVSVNGKVAV-LGERLEDDNAVVRIDGHVVSVKAQE 62
           +L K +A AG  SRR+ + LI  G V VNG+V   LG R+   + VV   G +++ +   
Sbjct: 149 RLNKYIANAGICSRRDADKLIEKGEVKVNGEVITELGYRVLLTDKVV-YKGKLINPEKPV 207

Query: 63  EVICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKIRGSRWISVGRLDANTSGLLLFTTDG 122
            V+       KP+  + T  DP  R+TV   +      R   VGRLD NT+GLLLFT DG
Sbjct: 208 YVLLN-----KPKDFITTTDDPMNRKTVMHLVSSACEERIFPVGRLDRNTTGLLLFTNDG 262

Query: 123 ELANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYAGGEGINHT 182
           ELA +L HP+ +V + Y V +   +T+     +  G+ LEDG+   +D+     +     
Sbjct: 263 ELAAKLSHPAEKVRKIYQVTLDSPITKTHFEEIAEGLTLEDGLVNVDDIQILSKD--RTI 320

Query: 183 FYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWMELDLKQVNYLR 240
             + I+ G+NR VRR++   G  V  L RV Y  +   K L RG W  L  K+V  L+
Sbjct: 321 LGLEIHVGKNRIVRRIFAHLGYEVVALDRVTYAGL-TKKDLSRGKWRFLTEKEVINLK 377