Pairwise Alignments

Query, 290 a.a., PHP domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., 5'-3' exoribonuclease from Escherichia coli ECOR38

 Score =  322 bits (826), Expect = 5e-93
 Identities = 160/282 (56%), Positives = 199/282 (70%), Gaps = 1/282 (0%)

Query: 4   DLHSHTTASDGRFTYQQLIDRAVSFEIDVLAITDHDTVAALADARAYIAQQQYPLQLVNG 63
           DLHSHTTASDG  T + L+ RAV   +  LAITDHDT AA+A AR  I++    L L+ G
Sbjct: 11  DLHSHTTASDGCLTPEALVHRAVEMRVGTLAITDHDTTAAIAPAREEISRSGLALNLIPG 70

Query: 64  IEISTVWQNKDIHIVGLNIDPNSEALGQLIARQQQRRVERAELIAHRLQKATREGVLEEV 123
           +EISTVW+N +IHIVGLNID     + + +A+Q +RR +RA+LIA RL+KA     LE  
Sbjct: 71  VEISTVWENHEIHIVGLNIDITHPLMCEFLAQQTERRNQRAQLIAERLEKAQIPRALEGA 130

Query: 124 QHIADGAPITRAHFAKWLVDNGYATNMQQVFKKYLTRDNPGYVPPNWCSMSEAVSAIHAA 183
           Q +A G  +TR HFA++LV+   A++M  VFKKYL R   GYVPP WC++ +A+  IH +
Sbjct: 131 QRLAQGGAVTRGHFARFLVECRKASSMADVFKKYLARGKTGYVPPQWCTIEQAIDVIHHS 190

Query: 184 GGQAVLAHPGRYDLTAKWLKRLMTAFVEAGGDAMEVAQPQQSPQEKRTLGDYAMEYQLLA 243
           GG+AVLAHPGRY+L+AKWLKRL+  F E  GDAMEVAQ QQSP E+  L   A ++ L A
Sbjct: 191 GGKAVLAHPGRYNLSAKWLKRLVAHFAEHHGDAMEVAQCQQSPNERTQLATLARQHHLWA 250

Query: 244 SQGSDFHYPSPWMELGRNLWLPAGVEPVWKDWGLSPSNRVER 285
           SQGSDFH P PW+ELGR LWLPAGVE VW+ W   P N  ER
Sbjct: 251 SQGSDFHQPCPWIELGRKLWLPAGVEGVWQLWE-QPQNTTER 291