Pairwise Alignments

Query, 290 a.a., PHP domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., 5'-3' exoribonuclease from Acinetobacter radioresistens SK82

 Score =  154 bits (390), Expect = 2e-42
 Identities = 94/286 (32%), Positives = 150/286 (52%), Gaps = 12/286 (4%)

Query: 3   IDLHSHTTASDGRFTYQQLIDRAVSFEIDVLAITDHDTVAALADARA--YIAQQQYPLQL 60
           IDLH+H+  SDG  + + L+  AV+  +  LA+TDHD +  +  A+A     +  Y L++
Sbjct: 4   IDLHTHSNISDGTLSPEALVHAAVAAGVHTLALTDHDNMDGIQRAKACSQTLEAPYSLRI 63

Query: 61  VNGIEISTVW------QNKDIHIVGLNIDPNSEALGQLIARQQQRRVERAELIAHRLQKA 114
           + G EIS+ W      ++  +H+V L +  N   L Q++ +Q++ R  RA  I H L   
Sbjct: 64  IPGAEISSQWSRPATKKSYGVHVVALGMQ-NPAPLLQMLEQQKRIRAARARHICHLLTDI 122

Query: 115 TREGVLEEVQHIADGAP--ITRAHFAKWLVDNGYATNMQQVFKKYLTRDNPGYVPPNWCS 172
            +  + E+V  + +G P  ITR H AK LV     +  QQ F +YL      +V      
Sbjct: 123 IQVDIYEQVLALVEGEPDRITRTHIAKALVQQQIVSRPQQAFDRYLKEGKKAFVNFEGLG 182

Query: 173 MSEAVSAIHAAGGQAVLAHPGRYDLTAKWLKRLMTAFVEAGGDAMEVAQPQQSPQEKRTL 232
           ++E +  IHA+ G AVLAHP RY L+A  ++ L+  F E+GGDA+E+         ++ +
Sbjct: 183 LAETIQVIHASRGFAVLAHPTRYTLSATNIRYLVELFAESGGDAIELPPASDPTSTRQMI 242

Query: 233 GDYAMEYQLLASQGSDFHYPS-PWMELGRNLWLPAGVEPVWKDWGL 277
                +Y L  S GSD+H  + PW++LG    L      +W+ + L
Sbjct: 243 DRLIQQYALKVSIGSDYHGENMPWLKLGNVPSLRPDQIGIWESFSL 288