Pairwise Alignments

Query, 396 a.a., tryptophan synthase subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 417 a.a., Tryptophan synthase beta chain (EC 4.2.1.20) from Sphingobium sp. HT1-2

 Score =  439 bits (1129), Expect = e-128
 Identities = 217/390 (55%), Positives = 293/390 (75%), Gaps = 10/390 (2%)

Query: 5   NAYFGEFGGQFVPQILVPALDQLEQAFIDAQQDDAFRAEFMSLLQEYAGRPTALTLTQNI 64
           N +FG FGG++V + L+P + +LE+ +  A+ D  F AE+  LL+ Y GRP  L   + +
Sbjct: 22  NGHFGAFGGRYVAETLMPLILELEKVYKAAKADPEFHAEYAELLRSYVGRPNPLYYAERL 81

Query: 65  TK--------GTKTKLYLKREDLLHGGAHKTNQVLGQALLAKRMGKHEIIAETGAGQHGV 116
           T+        G   K+YLKRE+L H GAHK N  +GQALLA+RMGK ++IAETGAGQHGV
Sbjct: 82  TEALRAKAEPGKGAKIYLKREELNHTGAHKINNCIGQALLARRMGKKKVIAETGAGQHGV 141

Query: 117 ATALACALLGLKCRVYMGAKDVERQSPNVFRMRLMGATVIPVHSGSATLKDACNEALRDW 176
           ATA   AL G++C+++MGAKDVERQ PNVFRM+L+GA VIPVHSGS+TLKD+ N+ALR W
Sbjct: 142 ATATVAALFGMECKIFMGAKDVERQKPNVFRMKLLGAEVIPVHSGSSTLKDSMNDALRYW 201

Query: 177 SASYETAHYLLGTAAGPHPFPTIVREFQRIIGEETKNQILAREGRLPDAVIACVGGGSNA 236
            ++     Y++GTAAGPHP+P +VR+FQ IIG+E ++QI+  EGRLPD +IA VGGGSNA
Sbjct: 202 VSNVHDTFYIIGTAAGPHPYPELVRDFQSIIGKEIRSQIMEAEGRLPDMLIAPVGGGSNA 261

Query: 237 IGMFADFIEEESVRLIGIEPAGKGIHTHQHGAPLKHGKTGIFFGMKAPLMQDEHGQVEES 296
           IGMF  F+++  V +IG+E AG+G+   +H A L  G +GI  G +  L+QDE GQ+ E+
Sbjct: 262 IGMFHPFLDDPEVAMIGVEAAGEGL-DKKHAASLAGGASGILHGNRTYLLQDEDGQITEA 320

Query: 297 YSVSAGLDFPSVGPQHAYLNAIGRAEYESITDDEALDAFQALARNEGIIPALESSHALAH 356
           +S+SAGLD+P +GP+H++L+ IGR +Y  I DDEAL++FQ L+R EGIIPALES+HA+A 
Sbjct: 321 HSISAGLDYPGIGPEHSWLHEIGRVKYLPIKDDEALESFQTLSRLEGIIPALESAHAVAA 380

Query: 357 AIKMAYAEPDKEQLLVVNLSGRGDKDIFTV 386
           A ++A    D ++++VVNLSGRGDKDIFTV
Sbjct: 381 AEQVA-PTLDADKIIVVNLSGRGDKDIFTV 409