Pairwise Alignments

Query, 418 a.a., dicarboxylate/amino acid:cation symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., C4 dicarboxylate transporter DctA (from data) from Pseudomonas simiae WCS417

 Score =  198 bits (504), Expect = 2e-55
 Identities = 118/407 (28%), Positives = 208/407 (51%), Gaps = 7/407 (1%)

Query: 16  QVVIAMLAGTAVGAAMGHDATLFAPLGAIFINLIKMLVIPLVAVALISGAAGLGDSHSAG 75
           QV++A++ G  +G           PLG  FI LIKM++ P++   ++SG AG+    S G
Sbjct: 14  QVIVAIVIGILLGHFYPQTGVALKPLGDGFIKLIKMVIAPIIFCTVVSGIAGMQSMKSVG 73

Query: 76  KVGAVTLSYFAITSAAAVALALIMGELFQPGVG--VDVSGVESMFSSEYAAQGELPTFWA 133
           K G   L YF I S  A+ + LI+  + QPG G  +DV+ +++   + Y   G+  +   
Sbjct: 74  KTGGYALLYFEIVSTVALLIGLIVVNVVQPGNGMHIDVATLDASKVAAYVTAGKDQSIVG 133

Query: 134 TIIGMIPTNVFQSLNEANILQILVFCLFLGIAISKQAKEKRDPVINAVNTIVDAMVWMIN 193
            I+ +IP  +  +    +ILQ+L+F +  G A+ +     + PV++ ++     M  +IN
Sbjct: 134 FILNVIPNTIVGAFANGDILQVLMFSVIFGFALHRLGAYGK-PVLDFIDRFAHVMFNIIN 192

Query: 194 KVMLIAPIGVFGLMADAVGTFGFSALMVVFKLFVVYVAAIAIFGFVAYPVMIQLFSKTSA 253
            +M +APIG  G MA  +G +G  +L+ + +L + +     +F  V    + +     S 
Sbjct: 193 MIMKLAPIGALGAMAFTIGAYGVGSLVQLGQLMICFYITCLLFVLVVLGGICRAHG-FSV 251

Query: 254 KKFIQAMKKPQAVALSTASSMATLPVTMDTVKNDLGVRNSTASFVLPLGATINMSGNAIY 313
            K I+ +++   + L T+SS + LP  +  ++  LG + S    V+P G + N+ G +IY
Sbjct: 252 IKLIRYIREELLIVLGTSSSESALPRMLIKMER-LGAKKSVVGLVIPTGYSFNLDGTSIY 310

Query: 314 YGLVAIFFAQLFNIDLSMGAYIAIIVTATLGAVGQAGVPGPSFLVVAVLLSA--GIPIEG 371
             + A+F AQ  +  + +   I +++   L + G AGV G  F+V+A  LSA   +P+ G
Sbjct: 311 LTMAAVFIAQATDTHMDITHQITLLLVLLLSSKGAAGVTGSGFIVLAATLSAVGHLPVAG 370

Query: 372 LPLLFALDRIFDMIRTALNITGDAACAVIVDSMITEEAAAELEKREA 418
           L L+  +DR     R   N+ G+A   ++V   + E    +L+   A
Sbjct: 371 LALILGIDRFMSEARALTNLVGNAVATIVVAKWVKELDTDKLQSELA 417