Pairwise Alignments

Query, 418 a.a., dicarboxylate/amino acid:cation symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 425 a.a., sodium:dicarboxylate symporter from Pseudomonas simiae WCS417

 Score =  248 bits (633), Expect = 2e-70
 Identities = 140/413 (33%), Positives = 239/413 (57%), Gaps = 19/413 (4%)

Query: 16  QVVIAMLAGTAVGAAMGHDA---------TLFAPLGAIFINLIKMLVIPLVAVALISGAA 66
           Q++I +LAG A+GA + H            L  P G IFI L+KM+V+P+V   ++ G A
Sbjct: 11  QIMIGLLAGIAIGALL-HQLPESRPWLVDNLLQPAGDIFIKLMKMIVVPIVFACMVVGIA 69

Query: 67  GLGDSHSAGKVGAVTLSYFAITSAAAVALALIMGELFQPGVGVDVSGVESMFSSEYAAQG 126
           G GD  S G++GA +L YF   +  A+ + L++G L +PG G ++S + +   +   + G
Sbjct: 70  GHGDGKSLGRIGARSLGYFFCITTLAIIVGLVLGNLLKPGAGTELSSLHAASITLPTSSG 129

Query: 127 ELPTFWATIIGMIPTNVFQSLNEANILQILVFCLFLGIAISKQAKEKRDPVINAVNTIVD 186
              +    I+G+IP NV  ++ + ++L +L F +  G+ +++   E++DPVI  +  + D
Sbjct: 130 AGHSLGQIIVGIIPDNVISAMAQGSLLSVLFFAVMFGLGVARLPAERKDPVIALLRGVSD 189

Query: 187 AMVWMINKVMLIAPIGVFGLMADAVGTFGFSALMVVFKLFVVYVAAIAIFGFVAYPVMIQ 246
           AM  + + +M  +PIGVFG++A  V  FGF +L+ + KL +V   +IA F  V   ++ +
Sbjct: 190 AMFKVTSMIMAYSPIGVFGMIAVTVANFGFGSLLPLAKLIMVSYVSIAFFVLVVLNLVAR 249

Query: 247 LFSKTSAKKFIQAMKKPQAVALSTASSMATLPVTMDTVKNDLGVRNSTASFVLPLGATIN 306
           L    +    ++ +K    +A STASS + +P  M  ++   GV  S  SFV+P+G + N
Sbjct: 250 LCG-INLFALMRHIKDELILAFSTASSASVMPQLMKKLET-YGVSPSLVSFVVPVGYSFN 307

Query: 307 MSGNAIYYGLVAIFFAQLFNIDLSMGAYIAIIVTATLGAVGQAGVPGPSFLVV-AVLLSA 365
           + G +++ G+  +F AQL+ IDLS+G    ++VT  L + G AGVPG  F+++ A L SA
Sbjct: 308 LDGASLFLGIGTLFVAQLYGIDLSLGDQALLVVTMVLTSKGAAGVPGFMFVILSATLASA 367

Query: 366 GIPIEGLPLLFALDRIFDMIRTALNITGDAACAVIV------DSMITEEAAAE 412
           G+P+EG+  +  + R+ +M  TALN+ G+A   +++      D+  T E +A+
Sbjct: 368 GLPLEGIAFIAGVYRLMEMPTTALNVLGNALAPLVIAKWEGRDAKATHEPSAK 420