Pairwise Alignments

Query, 418 a.a., dicarboxylate/amino acid:cation symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 434 a.a., sodium:dicarboxylate symporter from Pseudomonas simiae WCS417

 Score =  190 bits (483), Expect = 6e-53
 Identities = 131/401 (32%), Positives = 193/401 (48%), Gaps = 8/401 (1%)

Query: 7   KGLLNNIGVQVVIAMLAGTAVGAAMGHDATLFAPLGAIFINLIKMLVIPLVAVALISGAA 66
           K L  ++  QV+ AM  G A G      A  F  LG IF+ LIK  V PLV   ++ G A
Sbjct: 8   KPLYKDLTFQVIAAMFLGIAFGFLAPELAAGFKILGDIFLKLIKTAVAPLVFFTVVHGIA 67

Query: 67  GLGDSHSAGKVGAVTLSYFAITSAAAVALALIMGELFQPGVGV---DVSGVESMFSSEYA 123
             GD    GKVG   L YF + S  A+A+ L+ G L Q G G+     S   +  +S   
Sbjct: 68  SAGDIKRVGKVGLRALIYFEVVSTIALAIGLLWGNLLQIGSGMHDAHPSSAAATAASAAV 127

Query: 124 AQGELPTFWATII-GMIPTNVFQSLNEANILQILVFCLFLGIAISKQAKEKRDPVINAVN 182
           A+G  P      I G+ P N   +     +LQ+LV  +  G A+     E+R+ + + +N
Sbjct: 128 AKGHAPASTLDFIYGIFPDNFVGAFAGGQLLQVLVISVLFGFALLALKPERREVIEDGLN 187

Query: 183 TIVDAMVWMINKVMLIAPIGVFGLMADAVGTFGFSALMVVFKLFVVYVAAIAIFGFVAYP 242
            I +     IN +M  AP+G FG +A AVG+ G + LM +  L +++   IA F  V   
Sbjct: 188 RISECFFEFINLIMKFAPLGAFGSVAYAVGSNGTAVLMSLANLVLMFYVGIAFFICVVLG 247

Query: 243 VMIQLFSKTSAKKFIQAMKKPQAVALSTASSMATLPVTMDTVKNDLGVRNSTASFVLPLG 302
            + +L S  S  +F+  +K    + L TASS + LP  +  ++   G    +   VLP G
Sbjct: 248 AVCRL-SGFSLWRFLTYIKDEIFIVLGTASSESALPRLLQKLEK-FGCSKQSVGLVLPTG 305

Query: 303 ATINMSGNAIYYGLVAIFFAQLFNIDLSMGAYIAIIVTATLGAVGQAGVPGPSFLVVAVL 362
              N+ G +IY  L  +F A  + + LS    + II    + + G A V G SF+V A  
Sbjct: 306 YAFNLDGTSIYMSLCVLFIANAYGVPLSWEQQLGIIAIMLVTSKGAAAVSGGSFVVFAAT 365

Query: 363 LSA--GIPIEGLPLLFALDRIFDMIRTALNITGDAACAVIV 401
           ++A   +P EGL LLF + R   M     N  G++   V+V
Sbjct: 366 VTAIGVLPAEGLALLFGVYRFMSMAIATCNTIGNSVATVVV 406