Pairwise Alignments

Query, 418 a.a., dicarboxylate/amino acid:cation symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 435 a.a., C4-dicarboxylate transport protein from Pseudomonas putida KT2440

 Score =  185 bits (470), Expect = 2e-51
 Identities = 119/397 (29%), Positives = 195/397 (49%), Gaps = 7/397 (1%)

Query: 9   LLNNIGVQVVIAMLAGTAVGAAMGHDATLFAPLGAIFINLIKMLVIPLVAVALISGAAGL 68
           L  ++  Q++ A+L G  VG      A    PLG  FI LIKM++ P+V   +++G AG+
Sbjct: 3   LAKSLYFQILCAVLLGVVVGHFWAQQAVALKPLGDAFIKLIKMMIAPVVFCTIVTGIAGM 62

Query: 69  GDSHSAGKVGAVTLSYFAITSAAAVALALIMGELFQPGVG--VDVSGVESMFSSEYAAQG 126
            D  S G++ + TL  F   +  ++ + L    LF+PG G  +D + + +   S+Y A  
Sbjct: 63  TDKRSLGRLMSKTLLLFLGLTVVSLVIGLAAVYLFKPGAGMNIDPATLSTAGLSQYTASA 122

Query: 127 ELPTFWATIIGMIPTNVFQSLNEANILQILVFCLFLGIAISKQAKEKRDPVINAVNTIVD 186
              +     + +IP     + N+  +L +L   +  G A+S    EK  PV++ + +   
Sbjct: 123 AKLSVVDFFMHIIPDTFIGAFNKGEVLPVLFIAVLSGFALSSMG-EKGKPVLDVLESAST 181

Query: 187 AMVWMINKVMLIAPIGVFGLMADAVGTFGFSALMVVFKLFVVYVAAIAIFGFVAYPVMIQ 246
            +  +   +M  APIG FG +A  VG +G ++L  + KL      A A F  V    + +
Sbjct: 182 MVFRIFGYLMRFAPIGAFGALAFTVGQYGITSLGALAKLVGTLYIACAFFVLVVLGGICR 241

Query: 247 LFSKTSAKKFIQAMKKPQAVALSTASSMATLPVTMDTVKNDLGVRNSTASFVLPLGATIN 306
                S  K ++  ++   V L T+S+   LP  ++ ++  LG +      VLP G + N
Sbjct: 242 AHG-FSLWKLLRYFREEFLVVLGTSSTEPVLPRMLEKLEK-LGCKKGVVGLVLPTGYSFN 299

Query: 307 MSGNAIYYGLVAIFFAQLFNIDLSMGAYIAIIVTATLGAVGQAGVPGPSFLVVAVLLSA- 365
           + G AIY  L A+F AQ  NIDLS+G  + ++    L + G AGV G  F+ +A  L+  
Sbjct: 300 LDGTAIYLSLAAVFIAQACNIDLSLGQVVTMLAIMLLSSKGAAGVTGSGFVALASTLTVI 359

Query: 366 -GIPIEGLPLLFALDRIFDMIRTALNITGDAACAVIV 401
             IP+ GL LL  +DR     R   ++  +A   V+V
Sbjct: 360 HDIPLAGLALLIGVDRFMSEARALTSLASNAVATVVV 396