Pairwise Alignments

Query, 418 a.a., dicarboxylate/amino acid:cation symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., C4-dicarboxylate transport protein from Pseudomonas putida KT2440

 Score =  202 bits (514), Expect = 2e-56
 Identities = 123/414 (29%), Positives = 212/414 (51%), Gaps = 11/414 (2%)

Query: 9   LLNNIGVQVVIAMLAGTAVGAAMGHDATLFAPLGAIFINLIKMLVIPLVAVALISGAAGL 68
           L  ++ VQV++A+  G  +G           PLG  F+ LIKM++ P++   ++SG AG+
Sbjct: 7   LYKSLYVQVLVAITIGILLGHYYPETGVALKPLGDGFVKLIKMVIAPIIFCTVVSGIAGM 66

Query: 69  GDSHSAGKVGAVTLSYFAITSAAAVALALIMGELFQPGVG--VDVSGVESMFSSEYAAQG 126
               S GK G   L YF I S  A+ + L++  + +PG G  +DVS + +   + YAA G
Sbjct: 67  QSMKSVGKTGGYALLYFEIVSTIALIIGLVVVNVVKPGAGMHIDVSTLNASSVAAYAAAG 126

Query: 127 ELPTFWATIIGMIPTNVFQSLNEANILQILVFCLFLGIAISKQAKEKRDPVINAVNTIVD 186
              T    ++ +IP  V  +    +ILQ+L+F +  G A+ +     + PV++ ++    
Sbjct: 127 AQQTTVGFLLNVIPNTVVGAFANGDILQVLMFSVLFGFALHRLGSYGK-PVLDMIDRFAH 185

Query: 187 AMVWMINKVMLIAPIGVFGLMADAVGTFGFSALMVVFKLFVVYVAAIAIFGFVAYPVMIQ 246
            M  +IN +M +APIG FG MA  +G +G  +L+ +  L   +     +F  V    + +
Sbjct: 186 VMFNIINMIMKLAPIGAFGAMAFTIGQYGVGSLVQLGYLMACFYITCLLFVLVVLGGICR 245

Query: 247 LFSKTSAKKFIQAMKKPQAVALSTASSMATLPVTMDTVKNDLGVRNSTASFVLPLGATIN 306
                S  K I+ +++   + L T+SS + LP  +  ++  LG + S    V+P G + N
Sbjct: 246 AHG-FSVIKLIRYIREELLIVLGTSSSESALPRMLAKMER-LGAKKSVVGLVIPTGYSFN 303

Query: 307 MSGNAIYYGLVAIFFAQLFNIDLSMGAYIAIIVTATLGAVGQAGVPGPSFLVVAVLLSA- 365
           + G +IY  + A+F AQ  +  + +   I +++   + + G AGV G  F+V+A  LSA 
Sbjct: 304 LDGTSIYLTMAAVFIAQATDTTMDITHQITLLLVLLVASKGAAGVTGSGFIVLAATLSAV 363

Query: 366 -GIPIEGLPLLFALDRIFDMIRTALNITGDAACAVIVDSMITE----EAAAELE 414
             +P+ GL L+  +DR     R   N+ G+A   V+V   + E    + A+EL+
Sbjct: 364 GHLPVAGLALILGIDRFMSEARALTNLVGNAVATVVVAKWVKEMDNDKLASELD 417