Pairwise Alignments

Query, 591 a.a., aspartate--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., lysyl-tRNA synthetase from Pseudomonas simiae WCS417

 Score = 76.6 bits (187), Expect = 2e-18
 Identities = 76/291 (26%), Positives = 130/291 (44%), Gaps = 28/291 (9%)

Query: 2   RSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLI------FIDMRDREGIVQVVVDPDMAD 55
           R +YC  L K    +T E          + G I      F+ ++D  G +QV V+     
Sbjct: 41  RENYCDALQKQYADKTKEELAEAAIPVKVAGRIMLNRGSFMVIQDMTGRIQVYVNRKTLP 100

Query: 56  VFAVANQLRSEF--CIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDVLPLDFN 113
              +A+    +    I   G +    +  +  EM    V LL +SL        LP   +
Sbjct: 101 EETLASVKTWDMGDIIAAEGTLARSGKGDLYVEMT--HVRLLTKSLR------PLPDKHH 152

Query: 114 QKNSEEQRLKYRYLDLR-RPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEG 172
                EQR + RY+DL    E+    ++R++  + +R FL    FL++ETP+L +  P G
Sbjct: 153 GLTDTEQRYRQRYVDLIVNEEVRHTFRVRSQVIAHIRTFLMQRDFLEVETPML-QTIPGG 211

Query: 173 ARDYLVPSRVHKGSF---YALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEF 229
           A     P   H  +      L  +P+L+ + L++ GF++ ++I + FR+E +     PEF
Sbjct: 212 AA--AKPFETHHNALDMEMFLRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNPEF 269

Query: 230 TQIDIETSFMTAEQVRAVTEKMIREMWLELLNVDLGDFPIMPYSEAMRRFG 280
           T ++   ++   E    +TE++ R    EL  + LG   + PY + +  FG
Sbjct: 270 TMLEFYQAYADYEDNMDLTEELFR----ELAQLVLGSTDV-PYGDKVFHFG 315



 Score = 57.4 bits (137), Expect = 1e-12
 Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 19/190 (10%)

Query: 371 FLTEEIIQAIIERTQAQTGDIILFGADSAKVVAEALGALRLKAGKELGITNESAWAPLWV 430
           F+   +  +I++     T D  L   D A+ +A+  GA      K LG         L  
Sbjct: 318 FVRLSVFDSILKYNPELTADD-LNDIDKARAIAKKAGA------KVLGFEG------LGK 364

Query: 431 VDFPMFESDDEGNVAAMHHPFTSPLNLSPEQLKANPEEALSNAYDMVLNGYEVGGGSVRI 490
           +   +FE   E  +   H     P  +SP   + +    +++ +++ + G E+      +
Sbjct: 365 LQVMIFEELVEHKLEQPHFITQYPFEVSPLARRNDDNPNVTDRFELFIGGREIANAYSEL 424

Query: 491 HNAEMQSAVF-----DILGITPEEQRLKFGFLLDALKFGTPPHAGLAFGLDRLVMLLCGT 545
           ++AE Q+  F     D      E       F+  AL++G PP AG   G+DRLVMLL  +
Sbjct: 425 NDAEDQAERFMAQVADKDAGDDEAMHYDADFVR-ALEYGMPPTAGEGIGIDRLVMLLTNS 483

Query: 546 ENIRDVIAFP 555
            +IRDVI FP
Sbjct: 484 PSIRDVILFP 493