Pairwise Alignments

Query, 591 a.a., aspartate--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 505 a.a., Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 84.7 bits (208), Expect = 8e-21
 Identities = 74/291 (25%), Positives = 141/291 (48%), Gaps = 23/291 (7%)

Query: 18  VELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVANQLRSEFCIKLTGEVRA 77
           V + G +  RR +G   F+ ++D  G +Q+ V  D         Q +      + G   A
Sbjct: 68  VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGDILG---A 124

Query: 78  RPESQVNKEMATGEVELLARSLEIINRS-DVLPLDFNQKNSEEQRLKYRYLDL-RRPEMS 135
           + +    K   TGE+ +    L ++ ++   LP  F+    +E R + RYLDL    E  
Sbjct: 125 KGKLFKTK---TGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESR 181

Query: 136 DRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGA--RDYLVPSRVHKGSFYALPQS 193
           +  K R+K  + +R+F+   GF+++ETP++ +  P GA  R ++          Y L  +
Sbjct: 182 NTFKTRSKILAGIRQFMVARGFMEVETPMM-QVIPGGASARPFITHHNALDLDMY-LRIA 239

Query: 194 PQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTAEQVRAVTEKMIR 253
           P+L+ + L++ GF+R ++I + FR+E +     PEFT +++  ++   + +  +TE + R
Sbjct: 240 PELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFR 299

Query: 254 EMWLELLNVDLGDFPIMPYSEAMRRFGS--DKPDLRNPMEL----VDVADL 298
            +  ++L         +PY + +  FG   +K  +R  ++      D+ADL
Sbjct: 300 TLAQDVLGTTQ-----VPYGDEVFDFGKPFEKLTMREAIKKYRPETDMADL 345



 Score = 63.9 bits (154), Expect = 1e-14
 Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 16/179 (8%)

Query: 381 IERTQAQTGDIILFGADSAKVVAEALGALRLKAGKELGITNESAWAPLWVVDFPMFESDD 440
           I++ + +T    L   DSAK +AE++G           I  E +W  L  +   +F+   
Sbjct: 333 IKKYRPETDMADLDNFDSAKAIAESIG-----------IHVEKSWG-LGRIVTEIFDEVA 380

Query: 441 EGNVAAMHHPFTSPLNLSPEQLKANPEEALSNAYDMVLNGYEVGGGSVRIHNAEMQSAVF 500
           E ++         P  +SP   + +    +++ ++  + G E+G G   +++AE Q+  F
Sbjct: 381 EAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRF 440

Query: 501 ----DILGITPEEQRLKFGFLLDALKFGTPPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555
               +      +E        + AL+ G PP AGL  G+DR+VML   +  IRDVI FP
Sbjct: 441 LDQVNAKAAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499