Pairwise Alignments

Query, 591 a.a., aspartate--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 505 a.a., Lysyl-tRNA synthetase (class II) from Enterobacter asburiae PDN3

 Score = 82.8 bits (203), Expect = 3e-20
 Identities = 68/267 (25%), Positives = 131/267 (49%), Gaps = 17/267 (6%)

Query: 18  VELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVANQLRSEFCIKLTGEVRA 77
           V + G +  RR +G   F+ ++D  G +Q+ V  D         Q +      + G   A
Sbjct: 68  VAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVSRDDLPEGIYNEQFKKWDLGDILG---A 124

Query: 78  RPESQVNKEMATGEVELLARSLEIINRS-DVLPLDFNQKNSEEQRLKYRYLDLRRPEMSD 136
           + +    K   TGE+ +    L ++ ++   LP  F+    +E R + RYLDL   + S 
Sbjct: 125 KGKLFKTK---TGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDDSR 181

Query: 137 R-IKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGA--RDYLVPSRVHKGSFYALPQS 193
           +  K+R++  + +R+F+    F+++ETP++ +  P GA  R ++          Y L  +
Sbjct: 182 KTFKIRSQIMAGIRQFMVNRDFMEVETPMM-QVIPGGASARPFITHHNALDLDMY-LRIA 239

Query: 194 PQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTAEQVRAVTEKMIR 253
           P+L+ + L++ GFDR ++I + FR+E +     PEFT +++  ++   + +  +TE + R
Sbjct: 240 PELYLKRLVVGGFDRVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFR 299

Query: 254 EMWLELLNVDLGDFPIMPYSEAMRRFG 280
            +  ++L         +PY E +  FG
Sbjct: 300 TLAQDILGTTQ-----VPYGEEVFDFG 321



 Score = 67.8 bits (164), Expect = 1e-15
 Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 16/179 (8%)

Query: 381 IERTQAQTGDIILFGADSAKVVAEALGALRLKAGKELGITNESAWAPLWVVDFPMFESDD 440
           I++ + +T    L   DSAK +AE++G           I  E +W  L  +   +FE   
Sbjct: 333 IKKYRPETNMADLDNFDSAKAIAESIG-----------IKVEKSWG-LGRIVTEIFEEVA 380

Query: 441 EGNVAAMHHPFTSPLNLSPEQLKANPEEALSNAYDMVLNGYEVGGGSVRIHNAEMQSAVF 500
           E ++         P  +SP   + +    +++ ++  + G E+G G   +++AE Q+  F
Sbjct: 381 EAHLIQPTFITEYPAEVSPLARRNDENPEITDRFEFFIGGREIGNGFSELNDAEDQAQRF 440

Query: 501 ----DILGITPEEQRLKFGFLLDALKFGTPPHAGLAFGLDRLVMLLCGTENIRDVIAFP 555
               D      +E        + AL+ G PP AGL  G+DR+VML   +  IRDVI FP
Sbjct: 441 QDQVDAKAAGDDEAMFFDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFP 499