Pairwise Alignments

Query, 323 a.a., tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., tRNA methyltransferase from Pseudomonas simiae WCS417

 Score =  348 bits (894), Expect = e-101
 Identities = 169/307 (55%), Positives = 214/307 (69%), Gaps = 5/307 (1%)

Query: 17  LQLWLNTLPQQLTDWQAKQHGDLDRWMRNLKKIPVGQPEVIDLKNAVAAHNHQPLAQGEQ 76
           L +W   L  QL     K HGDL+RW   L  +P  QP  +DL N +    H       +
Sbjct: 16  LAVWAQGLQAQLDSKMEKGHGDLERWQSALDALPKIQPSEVDLLNGLTLDTH--CDDDTR 73

Query: 77  KKLEAVLKTFHPWRKGPYHLHGIHIDTEWRSDWKWDRLLPHISPLKNRLVLDVGCGNGYH 136
            ++   L    PWRKGP++L G+H+DTEWRSDWKW R+ PH++ LK + +LDVGCGNGY+
Sbjct: 74  AQMHTALMGLSPWRKGPFNLFGVHVDTEWRSDWKWSRVAPHLN-LKGKRILDVGCGNGYY 132

Query: 137 MWRMLGEGAQQVFGIDPSELFLIQFEAVRKLLGDDQRVHLLPLGIEQMPE-LNAFDTVFS 195
           MWRMLG GA  V G+DP+ LF  QF+AV++ L + +  HL P   E +P  L  FDTVFS
Sbjct: 133 MWRMLGAGADSVIGVDPNWLFFCQFQAVQRYLSEPKAWHL-PFPFEDLPSNLEGFDTVFS 191

Query: 196 MGVLYHRRSPLDHLLQLKNQLVAGGELILETLVVEGDEHTVLVPFDRYAQMRNVYFFPSA 255
           MGV YHRRSP++HLL LK+ LV GGEL+LETLVVEGD+  VLVP DRYAQMRNV+F PS 
Sbjct: 192 MGVFYHRRSPIEHLLALKDTLVKGGELVLETLVVEGDQQQVLVPEDRYAQMRNVWFLPSV 251

Query: 256 LALKVWLEKTGFVDVRIVDENITSLGEQRTTEWMTHNSLPDYVDPQDPSKTIEGYPAPRR 315
            AL +WL + GF DVR VD ++T++ EQR T+WM + SL D++DP+D SKTIEG PAP R
Sbjct: 252 PALMLWLRRAGFSDVRCVDVSVTTVEEQRGTQWMKYQSLSDFLDPEDHSKTIEGLPAPMR 311

Query: 316 AILIAKK 322
           A++IAKK
Sbjct: 312 AVIIAKK 318