Pairwise Alignments

Query, 323 a.a., tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., tRNA (mo5U34)-methyltransferase from Pseudomonas putida KT2440

 Score =  336 bits (862), Expect = 4e-97
 Identities = 173/323 (53%), Positives = 219/323 (67%), Gaps = 6/323 (1%)

Query: 1   MFNFANVYQQIAQHPQLQLWLNTLPQQLTDWQAKQHGDLDRWMRNLKKIPVGQPEVIDLK 60
           M + + + +++A  P L  W   L  QL     K HGDLDRW   L+ +P  QP  IDL 
Sbjct: 1   MIDLSPLVRRLAGTP-LASWSQGLQAQLDAKLEKGHGDLDRWRGALEALPALQPSEIDLV 59

Query: 61  NAVAAHNHQPLAQGEQKKLEAVLKTFHPWRKGPYHLHGIHIDTEWRSDWKWDRLLPHISP 120
           N +        A   Q  +   L    PWRKGP+ L G+H+DTEWRSDWKW R+ PH+  
Sbjct: 60  NGLRLDCDCDDATRAQ--MRQALMGLSPWRKGPFDLFGVHVDTEWRSDWKWSRVGPHLD- 116

Query: 121 LKNRLVLDVGCGNGYHMWRMLGEGAQQVFGIDPSELFLIQFEAVRKLLGDDQRVHLLPLG 180
           L+ + VLDVGCGNGY+ WRMLG GA  V G+DP+ LF  QF+AV++ L +    HL P  
Sbjct: 117 LQGKRVLDVGCGNGYYQWRMLGAGADMVIGVDPNWLFFCQFQAVQQYLPELPAWHL-PFA 175

Query: 181 IEQMP-ELNAFDTVFSMGVLYHRRSPLDHLLQLKNQLVAGGELILETLVVEGDEHTVLVP 239
           +E +P  L  FDTVFSMGV YHRRSP++HLL LK+ LV GGEL+LETLV+EGDE+ VLVP
Sbjct: 176 LEDLPANLEGFDTVFSMGVFYHRRSPIEHLLALKDCLVKGGELVLETLVIEGDENQVLVP 235

Query: 240 FDRYAQMRNVYFFPSALALKVWLEKTGFVDVRIVDENITSLGEQRTTEWMTHNSLPDYVD 299
            DRYAQMRNV++ PS  AL  WL + GF DVR VD ++TS+ EQR+T+WM + SL D++D
Sbjct: 236 EDRYAQMRNVWYLPSVPALARWLRRAGFSDVRCVDVSVTSVEEQRSTDWMRYQSLSDFLD 295

Query: 300 PQDPSKTIEGYPAPRRAILIAKK 322
           P D SKT+EG PAPRRA L+A+K
Sbjct: 296 PNDHSKTVEGLPAPRRATLLARK 318