Pairwise Alignments

Query, 323 a.a., tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB from Erwinia tracheiphila SCR3

 Score =  443 bits (1140), Expect = e-129
 Identities = 212/324 (65%), Positives = 255/324 (78%), Gaps = 3/324 (0%)

Query: 1   MFNFANVYQQIAQHPQLQLWLNTLPQQLTDWQAKQ-HGDLDRWMRNLKKIPVGQPEVIDL 59
           M +F N YQ IA+ P L  WL  LP QL  WQ +Q HG    W R ++ +P+ QPE +DL
Sbjct: 1   MMDFGNFYQLIAKGP-LAYWLEILPAQLAAWQREQLHGHFKNWDRAVEYLPLMQPETLDL 59

Query: 60  KNAVAAHNHQPLAQGEQKKLEAVLKTFHPWRKGPYHLHGIHIDTEWRSDWKWDRLLPHIS 119
            ++V+A + Q L++ ++  +E +L+   PWRKGPY L+G+HIDTEWRSDWKW+R+LPHIS
Sbjct: 60  LHSVSAESSQ-LSERQRDGIEKLLRNLMPWRKGPYSLYGVHIDTEWRSDWKWERVLPHIS 118

Query: 120 PLKNRLVLDVGCGNGYHMWRMLGEGAQQVFGIDPSELFLIQFEAVRKLLGDDQRVHLLPL 179
           PL  R +LDVGCG+GYHMWRM+G GA    GIDP +LFL QFEAVRKLLG+DQR HLLPL
Sbjct: 119 PLAGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPMQLFLCQFEAVRKLLGNDQRAHLLPL 178

Query: 180 GIEQMPELNAFDTVFSMGVLYHRRSPLDHLLQLKNQLVAGGELILETLVVEGDEHTVLVP 239
           GIEQ+PEL  FDTVFSMGVLYHRRSP DHLLQL+NQLV+GGEL+LETLVVEGDE  VLVP
Sbjct: 179 GIEQLPELKVFDTVFSMGVLYHRRSPFDHLLQLRNQLVSGGELVLETLVVEGDERAVLVP 238

Query: 240 FDRYAQMRNVYFFPSALALKVWLEKTGFVDVRIVDENITSLGEQRTTEWMTHNSLPDYVD 299
            +RYAQMRNV+F PS  ALK WLEK GFVDVRI D ++TS  EQR T WMT  SL +++D
Sbjct: 239 GERYAQMRNVWFIPSTAALKSWLEKCGFVDVRIADYSLTSTEEQRRTSWMTSESLAEFLD 298

Query: 300 PQDPSKTIEGYPAPRRAILIAKKP 323
           PQD SKT+EGYPAP RA+L+A+KP
Sbjct: 299 PQDNSKTVEGYPAPLRAVLVARKP 322