Pairwise Alignments

Query, 502 a.a., gonadoliberin III from Vibrio cholerae E7946 ATCC 55056

Subject, 510 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  308 bits (789), Expect = 3e-88
 Identities = 182/500 (36%), Positives = 286/500 (57%), Gaps = 10/500 (2%)

Query: 9   ISVFLLFATGITLSVLRHQDYGVPWTPGETRQVWDIEARIEFAAQGKE-AKVSLAAPLTQ 67
           I + +L   GI+++  +    G+P T   T  +W+I+A++EF A  K+  K+ +  P   
Sbjct: 10  ILIAILVVLGISVTAYQIFVLGIPVTEDATDDLWNIDAKVEFVASPKDPVKIQMFVPPLS 69

Query: 68  EGYTLINETASSPGYGISYLNTESGRRIEWSIRQASGPQTIYYKAQFLVDPQAKAVQIPP 127
             +  +NE+  S  YG+S   T+  R++ WS R+A G QT+YY+         + V+I  
Sbjct: 70  RDFVSLNESFISNNYGVSVNRTDGNRKVTWSARRAKGNQTLYYRLVLTKRYSGEKVKIKG 129

Query: 128 TQPITKPAFDGPEESAAIALIDSASQRSADHVTFARELIKGLNDSESQNASLLL----NK 183
                  A +GPE+ AA AL+    Q SAD  TF  E IK  N+    N  LLL    + 
Sbjct: 130 PTFRDSIAVEGPEKIAAEALLAPIRQHSADVETFISEAIKRTNNLNDDNVKLLLAGDPST 189

Query: 184 MSKVDATQKLLSYALVPNKVVGVIQLEDGRRRQSIQHMNEVWNGSAWILFNPETGTQPTH 243
             K    + LLS A VP + V  I+L    + Q+ +     +NG+ W+ FNPETG Q   
Sbjct: 190 PHKAKIVELLLSIAHVPVEKVHTIRLV-ADQPQTPELWLRSFNGNDWLYFNPETGEQGLP 248

Query: 244 PNLLVWDESNVSLLDVVGGQNSQVMFSMISQKVSP---QQATDSKVEADGLLNLSIHSLP 300
            + L+W   + +L+ V GG+ + V FS+ + +++     + TD   +A+  L  S++ LP
Sbjct: 249 ADRLLWWTGDENLITVDGGKKATVTFSLNNSEMNAIRLAKLTDENTDAN-FLEYSLYGLP 307

Query: 301 LEEQAMFKTIMLIPIGALIVVFLRVIVGLKTSGTFMPVLIAVAFVQTQLTTGIVGFLLIV 360
           L+ Q  F  +++IPIG L+++ LR ++GL+T GTF PVLIA+AF +TQL  GIV F +I 
Sbjct: 308 LQTQQTFMIMVMIPIGVLVILILRNLIGLQTLGTFTPVLIALAFRETQLGFGIVLFTIIT 367

Query: 361 GTGLIIRSYLSKLNLLLVARISAVIITVILIISVFTVVAFKVGLTEGLTITFFPMIILSW 420
             GL +RSYL  L L ++ R+S V+  V+++I+  ++ + K+GL  GL++  FPM+IL+ 
Sbjct: 368 ALGLSLRSYLEHLKLQMLPRLSVVLTFVVVLIAAISLFSHKLGLERGLSVALFPMVILTM 427

Query: 421 TIERMSILWEEEGAKEVLLQGGGSLFTAILIYLAMTNTYVQHLTFNFIGLQLVVLAAILL 480
           TIER+SI WEE GA   L    G+LF A L +L M+   + +  F F  + L+++  +L 
Sbjct: 428 TIERLSITWEERGANHALKVAIGTLFAASLAHLIMSVPELIYFVFTFPAILLILVGFMLA 487

Query: 481 LGTYTGYRISELRRFKPLVE 500
           +G Y GYR++EL RFK  ++
Sbjct: 488 MGRYRGYRLTELVRFKAFLK 507