Pairwise Alignments

Query, 502 a.a., gonadoliberin III from Vibrio cholerae E7946 ATCC 55056

Subject, 511 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  304 bits (778), Expect = 6e-87
 Identities = 179/505 (35%), Positives = 280/505 (55%), Gaps = 18/505 (3%)

Query: 9   ISVFLLFATGITLSVLRHQDYGVPWTPGETRQVWDIEARIEFAAQGKE-AKVSLAAPLTQ 67
           + + +L   G+ ++  +    G+P T  ET  +W+I+A++EF A  K+  KV +  P   
Sbjct: 10  VLITVLVLLGVAVTAYQIFVLGIPVTEDETDDLWNIDAKVEFVASSKDPVKVQMFVPPLN 69

Query: 68  EGYTLINETASSPGYGISYLNTESGRRIEWSIRQASGPQTIYYKAQFLVDPQAKAVQIPP 127
             Y  +NE+  S  YG+S    +  R++ WS R+ASG QT+YY+         +  ++  
Sbjct: 70  RDYVSLNESFISNNYGVSINRADGNRKVTWSARRASGNQTLYYRLVLTKRYSNEKTKVKG 129

Query: 128 TQPITKPAFDGPEESAAIALIDSASQRSADHVTFARELIKGLNDSESQNASLLL----NK 183
                  A +GPE+ AA AL+    Q SAD  TF  E IK +N+    N  LLL    + 
Sbjct: 130 PTFRDSLAVEGPEKIAAEALMAPIRQHSADVETFVSETIKRVNNLNDDNVKLLLAGDTSA 189

Query: 184 MSKVDATQKLLSYALVPNKVVGVIQLEDGRRRQSIQHMNEVW----NGSAWILFNPETGT 239
           M K      LLS A VP + V  I+L             E+W    NG  W+ FNP+TG 
Sbjct: 190 MKKAQVIDLLLSIAHVPMEKVHTIRL-----LADTPQTPELWLRSFNGDDWLYFNPDTGE 244

Query: 240 QPTHPNLLVWDESNVSLLDVVGGQNSQVMFSMISQKVSP---QQATDSKVEADGLLNLSI 296
           Q    + L+W   + +L+ V GG+ + V FSM + +++     + TD   +AD  L  S+
Sbjct: 245 QGLPSDRLLWWTGDDNLITVDGGKKATVTFSMNNSEMNAIRLAKLTDENTDAD-FLEYSL 303

Query: 297 HSLPLEEQAMFKTIMLIPIGALIVVFLRVIVGLKTSGTFMPVLIAVAFVQTQLTTGIVGF 356
           + LPL+ Q  F  +++IPIG L+++ LR ++G++  GTF PVLIA+AF +TQL  GI+ F
Sbjct: 304 YGLPLQTQQTFMIMVMIPIGVLVILVLRNLIGIQALGTFTPVLIALAFRETQLGFGIMLF 363

Query: 357 LLIVGTGLIIRSYLSKLNLLLVARISAVIITVILIISVFTVVAFKVGLTEGLTITFFPMI 416
            +I   GL +RSYL  L L ++ R+S V+  V+++I+  ++ + K+GL  GL++  FPM+
Sbjct: 364 TVITALGLSLRSYLEHLKLQMLPRLSVVLTFVVVLIAAISLFSHKLGLERGLSVALFPMV 423

Query: 417 ILSWTIERMSILWEEEGAKEVLLQGGGSLFTAILIYLAMTNTYVQHLTFNFIGLQLVVLA 476
           IL+ TIER+SI WEE G    +    G+LF A L +L M    + +  F F  + L+++ 
Sbjct: 424 ILTMTIERLSITWEERGGGHAMKVAIGTLFAASLAHLLMMVPELVYFVFTFPAVLLILVG 483

Query: 477 AILLLGTYTGYRISELRRFKPLVEE 501
            +L +G Y GYR++EL RFK  + +
Sbjct: 484 FMLAMGRYRGYRLTELVRFKAFLNK 508