Pairwise Alignments

Query, 311 a.a., HDOD domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score = 43.5 bits (101), Expect = 6e-09
 Identities = 35/157 (22%), Positives = 73/157 (46%), Gaps = 14/157 (8%)

Query: 42  ISLPPIPDVVLKIQRLCLAESTSISDVADCLIEDPGLSAIVIRVANSVVFNRRNITCTDI 101
           IS+PP P +++ +Q         +  +A  + +DPGLS  ++++ NS  F   N     I
Sbjct: 17  ISVPPQPQIMVDLQMEQYMPDPDLEVIARLISQDPGLSGALLKIVNSSYFGLSN-KIASI 75

Query: 102 VTAVSRLGILRVRDIVTAQAIEQLKYSVNLSKECNRILLKSATISREMGATMLLVTQTFK 161
             AV+ LG   + +++ A +I+       +S +    L +    ++++  T L +     
Sbjct: 76  QRAVNLLGSRSIINLINALSIKG-----EMSDDTIVTLNRFWDTAQDVAMTCLTL----- 125

Query: 162 CVDAKKYQYLELEKALLVGLLADIGIFCLVNEYHLYL 198
              AK+     +++A  +GL  D G+  ++  +  Y+
Sbjct: 126 ---AKRTGAQAVDEAYALGLFHDCGVPLMLKRFPNYM 159