Pairwise Alignments

Query, 311 a.a., HDOD domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score = 50.4 bits (119), Expect = 5e-11
 Identities = 53/240 (22%), Positives = 109/240 (45%), Gaps = 22/240 (9%)

Query: 25  LESEFAQLVELSISTGKISLPPIPDVVLKIQRLCLAESTSISDVADCLIEDPGLSAIVIR 84
           L  +  Q +  +I   ++ LP +P+V L I++       SIS ++  +  D  LSA +I+
Sbjct: 4   LAEKVQQALVRAIDNDELVLPTLPEVALNIRQAAEDPEISISHLSKVIGRDTALSARLIK 63

Query: 85  VANSVVFNRRNITCTDIVTAVSRLGILRVRDIVTAQAIEQLKYSVN--LSKECNRILLKS 142
           V NS +  R     TD+ TA++RLG     ++     +EQ+ ++ +  + ++   +  +S
Sbjct: 64  VVNSPLL-RATQEVTDLHTAITRLGTNYSSNLAIGLVMEQIFHARSDVVEQKMRDVWRRS 122

Query: 143 ATISREMGATMLLVTQTFKCVDAKKYQYLELEKALLVGLLADIGIFCLVN--EYHLYLQN 200
             ++   G +  L          + +  L+ ++A L GL+  IG+  ++   E H  L  
Sbjct: 123 LEVA---GVSYAL---------CRSHSQLKPDQAALGGLVHQIGVLPILTYAEDHYEL-- 168

Query: 201 GNYLDPTIALKIFQSQCSPISQLVLRHWGFDHDFLEVACN-TELVTERQEVTYLDIARIA 259
               DP     + +S    +   +L  W F     ++     +L  +  ++ Y+D+ ++A
Sbjct: 169 --LADPVSLNHVIESIHPLLGDKLLGVWDFPEMLAKLPGQYLDLERDSPKLDYIDLVQVA 226