Pairwise Alignments

Query, 301 a.a., DUF340 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., FIG003145: Surface protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  292 bits (747), Expect = 7e-84
 Identities = 155/297 (52%), Positives = 211/297 (71%), Gaps = 1/297 (0%)

Query: 1   MLSGMIFVFAPLVVGYLFIIRNPSHLHRLSRATSHLVYVILFLMGLSLAGLDNLQSNLQT 60
           M SG++ +  PL+VGYL  +R+ + L  ++R  S +VY+ILF MG+SLA LDNL SNL  
Sbjct: 1   MFSGLLIILVPLIVGYLIPLRHKAALQLINRLLSWIVYLILFFMGISLAFLDNLASNLVA 60

Query: 61  IVKYTAVFFVVLGTCNLLVLPLVDRYLPLSTDITHKKVPLS-SMMLESAKLILVVGAGLV 119
           I  Y+AV   ++  CN+  L  ++R LP       +K+P   +M LES +L  VV  G V
Sbjct: 61  IFHYSAVSITIILLCNIAALLWLERILPWRHHHQQEKLPSRIAMALESLQLCGVVVLGFV 120

Query: 120 AGVLLNQDLHWVESASGWILFLLLFFIGIQLRNSGLSLKQILLNKHGMVIAAVIILTSWL 179
            G+     L     AS + L  LLF +GIQLRNSG++LKQI+LN+ GM++A V++ +S L
Sbjct: 121 IGLSGLSVLQHATEASEYTLIFLLFLVGIQLRNSGMTLKQIVLNRRGMMVAVVVVASSLL 180

Query: 180 GGVIAAWLLDMPIYQALAMASGFGWYSLAGILVGDAFGPVLGGASFMIELLRELVALVLI 239
           GGVI A++LD+P+  ALAMASGFGWYSL+GIL+ ++FGPV+G A+F  +L REL+A++LI
Sbjct: 181 GGVINAFILDLPLKTALAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELLAIMLI 240

Query: 240 PMLIRRKPCTAIGYAGATAMDFTLPVIQTTGGVKCVPVAIVSGFILSLLVPVLILFF 296
           P L+RR   TA+G  GAT+MDFTLPV+Q +GGV+ VP AIV GFILSLLVP+L+ FF
Sbjct: 241 PGLVRRSRSTALGLCGATSMDFTLPVLQRSGGVEIVPAAIVHGFILSLLVPLLMAFF 297