Pairwise Alignments

Query, 284 a.a., transcriptional regulator HexR from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., RpiR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  119 bits (299), Expect = 6e-32
 Identities = 83/285 (29%), Positives = 143/285 (50%), Gaps = 5/285 (1%)

Query: 1   MNTLEKIQKNLENFSKSERKVAEVIMASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDT 60
           M+ L +I+   + FS  E ++A++++     A  +S+  L++ A+VS  T++RF R +  
Sbjct: 1   MDILYQIRARQDAFSAGEGRIAKLMLNDVGFAASASLEELSQRAEVSTATLSRFARSVGC 60

Query: 61  KGFPDFKLHLAQSLANGTPYVNRNVEEDDGPDAYTHKIFESTMACLDVAKNSLDPVQINR 120
           +   D +L LAQ+   G+ +++     +    A+  +I     A L    +  +      
Sbjct: 61  RDLRDLRLQLAQASGVGSRFLDPAGLPEQS--AFHRQILGDIEATLRQHLSGFNQASFVD 118

Query: 121 AVDLLTQAKRISFFGLGASSAVARDA-QNKFIRFNIPISCFEDIVMQRMSCINCTDNDVI 179
           AV LL +A+ I  FG+G  S++  D  Q + +R   PI+   D VM R++         +
Sbjct: 119 AVSLLGKARMIHAFGMGGPSSLCSDELQVRLVRLGYPIAACHDPVMMRVTAATLGPEHAL 178

Query: 180 VLISHTGRTKSQVEIANLARENGATVIAITAKDSPLDKASSLSICLDVPEDTDVYMPMAS 239
           ++ S TG T   +++  LAR   A ++AIT  DSPL + + + + L   E + +Y P A+
Sbjct: 179 IVCSLTGLTPELLDVVTLARNYDARIVAITLADSPLAQLADVLLPLQPAETSFIYKPTAA 238

Query: 240 RVVQMTVIDVLATGFTLRRGSGFRENLKRVKEVLKDSR--YDKLP 282
           R   +  ID+LAT   L      +E L+R+K  L D R   D LP
Sbjct: 239 RYGLLLAIDLLATELALALPDDNQERLRRIKLALDDYRGGPDSLP 283