Pairwise Alignments

Query, 284 a.a., transcriptional regulator HexR from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., Sialic acid utilization regulator, RpiR family from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  109 bits (272), Expect = 8e-29
 Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 9/279 (3%)

Query: 1   MNTLEKIQKNLENFSKSERKVAEVIMASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDT 60
           ++TL  +QK+L   +++ +++A+ I+A P+    SSIA L++     E TV RFCR L  
Sbjct: 14  LDTLGAMQKSL---TRASQRIAQYILAFPRQVTQSSIADLSRETQAGEATVIRFCRTLGY 70

Query: 61  KGFPDFKLHLAQSLA-----NGTPYVNRNVEEDDGPDAYTHKIFESTMACLDVAKNSLDP 115
           KGF DFK+ LA  LA     + +P ++  V E D   A   K+  +    L    N LD 
Sbjct: 71  KGFQDFKMDLAIELATTESDDSSPLLDAEVSESDDAHAIGLKLQNTISNVLSETLNLLDM 130

Query: 116 VQINRAVDLLTQAKRISFFGLGASSAVARDAQNKFIRFNIPISCFEDIVMQRMSCINCTD 175
            Q+   VD L     +  FG+G+S   A D ++K +R  +      +     M       
Sbjct: 131 QQVLGVVDALRHCHSVYIFGVGSSGITALDMKHKLMRIGLRGDAVSNNHFMYMQATLLKA 190

Query: 176 NDVIVLISHTGRTKSQVEIANLARENGATVIAITAK-DSPLDKASSLSICLDVPEDTDVY 234
            DV + +SH+G +   V    LAR+ GAT +AIT    SPL + +   +     +     
Sbjct: 191 GDVAMGVSHSGTSPETVHSLRLARQAGATTVAITHNLGSPLCEEADFCLINGNRQGMLQG 250

Query: 235 MPMASRVVQMTVIDVLATGFTLRRGSGFRENLKRVKEVL 273
             + ++  Q+ V D+L T          RE+  R    L
Sbjct: 251 DSIGTKAAQLFVFDLLYTLLVQSSPEQARESKLRTMNAL 289