Pairwise Alignments

Query, 284 a.a., transcriptional regulator HexR from Vibrio cholerae E7946 ATCC 55056

Subject, 282 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score = 87.4 bits (215), Expect = 3e-22
 Identities = 58/213 (27%), Positives = 108/213 (50%), Gaps = 4/213 (1%)

Query: 1   MNTLEKIQKNLENFSKSERKVAEVIMASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDT 60
           MN L +I++  +  ++S++K+A+ ++  P TA H S   LA  A VS+ +V +F ++L  
Sbjct: 1   MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY 60

Query: 61  KGFPDFKLHLAQSLA----NGTPYVNRNVEEDDGPDAYTHKIFESTMACLDVAKNSLDPV 116
           KGFP  KL L+++LA    + +  ++  +  DD       K+ +   A +    N     
Sbjct: 61  KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE 120

Query: 117 QINRAVDLLTQAKRISFFGLGASSAVARDAQNKFIRFNIPISCFEDIVMQRMSCINCTDN 176
           +++  V +L  A+RI   G+GAS  VA++   K ++     +   D+     +    + +
Sbjct: 121 KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD 180

Query: 177 DVIVLISHTGRTKSQVEIANLARENGATVIAIT 209
           D+++ IS+TG  +     A+     G  V+AIT
Sbjct: 181 DLLLAISYTGVRRELNLAADEMLRVGGKVLAIT 213