Pairwise Alignments

Query, 284 a.a., transcriptional regulator HexR from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score =  405 bits (1042), Expect = e-118
 Identities = 202/280 (72%), Positives = 239/280 (85%)

Query: 1   MNTLEKIQKNLENFSKSERKVAEVIMASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDT 60
           MN LEKIQ  LE+ SKSERKVAEVI+ASP  AIHSSIA +A  A+VSEPTVNRFCR +DT
Sbjct: 1   MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAAMALEANVSEPTVNRFCRSMDT 60

Query: 61  KGFPDFKLHLAQSLANGTPYVNRNVEEDDGPDAYTHKIFESTMACLDVAKNSLDPVQINR 120
           +GFPDFKLHLAQSLANGTPYVNRNV EDD  ++YT KIFES MA LD  ++SLD   INR
Sbjct: 61  RGFPDFKLHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKSAINR 120

Query: 121 AVDLLTQAKRISFFGLGASSAVARDAQNKFIRFNIPISCFEDIVMQRMSCINCTDNDVIV 180
           AVDLLTQAK+I+FFGLG+S+AVA DA NKF RFN+P+   +DIV+QRMSC+NC+D DV+V
Sbjct: 121 AVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDGDVVV 180

Query: 181 LISHTGRTKSQVEIANLARENGATVIAITAKDSPLDKASSLSICLDVPEDTDVYMPMASR 240
           LISHTGRTK+ VE+A LAREN A VIA+T+  +PL + ++L+I LDVPEDTD+YMPM SR
Sbjct: 181 LISHTGRTKNLVELAQLARENDAMVIALTSAGTPLAREATLAITLDVPEDTDIYMPMVSR 240

Query: 241 VVQMTVIDVLATGFTLRRGSGFRENLKRVKEVLKDSRYDK 280
           + Q+TVIDVLATGFTLRRG+ FR+NLKRVKE LK+SR+DK
Sbjct: 241 LAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKESRFDK 280