Pairwise Alignments

Query, 284 a.a., transcriptional regulator HexR from Vibrio cholerae E7946 ATCC 55056

Subject, 283 a.a., putative HTH-type transcriptional regulator YbbH from Alteromonas macleodii MIT1002

 Score =  419 bits (1076), Expect = e-122
 Identities = 208/280 (74%), Positives = 245/280 (87%)

Query: 1   MNTLEKIQKNLENFSKSERKVAEVIMASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDT 60
           MN LEKI +N   FSKSE+KVAEVI+A+PQTAIHSSIATLAKM+DVSEPTVNRFCRRLDT
Sbjct: 1   MNILEKITQNQAAFSKSEKKVAEVILANPQTAIHSSIATLAKMSDVSEPTVNRFCRRLDT 60

Query: 61  KGFPDFKLHLAQSLANGTPYVNRNVEEDDGPDAYTHKIFESTMACLDVAKNSLDPVQINR 120
           KGFPDFKLHLAQSLANGTPYVNR+V+E+D PD YT+KIFESTMA L+VA+ S+D   +NR
Sbjct: 61  KGFPDFKLHLAQSLANGTPYVNRHVDENDSPDEYTNKIFESTMASLEVARQSVDVNVVNR 120

Query: 121 AVDLLTQAKRISFFGLGASSAVARDAQNKFIRFNIPISCFEDIVMQRMSCINCTDNDVIV 180
            VDLLTQA++ISFFGLGAS++VA DA NKF RFN+P+  FEDI+MQRMSC+NC+D DV+V
Sbjct: 121 VVDLLTQAQKISFFGLGASASVAHDALNKFFRFNVPVVYFEDILMQRMSCMNCSDGDVVV 180

Query: 181 LISHTGRTKSQVEIANLARENGATVIAITAKDSPLDKASSLSICLDVPEDTDVYMPMASR 240
           LISHTGRTKS VEIA +AR N ATV+ IT+ DSPL +  S  + L+VPEDTD+YMPMASR
Sbjct: 181 LISHTGRTKSLVEIAQIARMNDATVVGITSADSPLAQECSYVLSLEVPEDTDMYMPMASR 240

Query: 241 VVQMTVIDVLATGFTLRRGSGFRENLKRVKEVLKDSRYDK 280
           + Q+T+IDVLATGFTLRRG+ FRENLKRVK+ L+ SRY+K
Sbjct: 241 IAQLTLIDVLATGFTLRRGNKFRENLKRVKDTLRGSRYEK 280