Pairwise Alignments

Query, 558 a.a., transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

 Score =  732 bits (1890), Expect = 0.0
 Identities = 362/560 (64%), Positives = 461/560 (82%), Gaps = 7/560 (1%)

Query: 1   MNIDVVLLLEQNPILLIFVVLAIGLSFGKIRFGSFQLGNSIGVLITSLIMGHLGFSFTPE 60
           MNI+V  LL  N ILL+FVVLA+GL  GK+R GS QLGNSIGVL+ SL++G   FS   +
Sbjct: 1   MNINVAELLNGNYILLLFVVLALGLCLGKLRLGSIQLGNSIGVLVVSLLLGQQHFSINTD 60

Query: 61  ALTIGFMLFIYCVGIEAGPNFFGIFFRDGKHYLILSLVVLITATWIAYFGGYYLNLDYGL 120
           AL +GFMLFI+CVG+EAGPNFF IFFRDGK+YL+L+LV++ +A  IA   G     D GL
Sbjct: 61  ALNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMVGSALVIALGLGKLFGWDIGL 120

Query: 121 AAGMMAGALTSTPVLVGAQDAL-NSGLAAVPRHMDLSLILDNVSVGYAMAYLIGLISMIM 179
            AGM+AG++TSTPVLVGA D L +SG+ +      LSL LDN+S+GYA+ YLIGL+S+I+
Sbjct: 121 TAGMLAGSMTSTPVLVGAGDTLRHSGMES----RQLSLALDNLSLGYALTYLIGLVSLIV 176

Query: 180 FAKLLPKLQKQNLSDSAQQIAQERGLGSQ--RKVYLPIIRAYRVGPELINWIDGRNLREL 237
            A+ LPKLQ Q+L  SAQQIA+ERGL +   RKVYLP+IRAYRVGPEL+ W DG+NLREL
Sbjct: 177 GARYLPKLQHQDLQTSAQQIARERGLDTDANRKVYLPVIRAYRVGPELVAWTDGKNLREL 236

Query: 238 GIYRQTGCYIERIRRHGILAHPDGDAILQEGDEIALVGFPDSHARLDPSFRNGKEVFDRN 297
           GIYRQTGCYIERIRR+GILA+PDGDA+LQ GDEIALVG+PD+HARLDPSFRNGKEVFDR+
Sbjct: 237 GIYRQTGCYIERIRRNGILANPDGDAVLQMGDEIALVGYPDAHARLDPSFRNGKEVFDRD 296

Query: 298 LLDLRISEEEIVVKSDSIAGKRLSDLNLSEYGCFLNRVVRAQIEMPMDLDIVLAKGDVLQ 357
           LLD+RI  EE+VVK+ +  GKRL+ L L+++GCFLNRV+R+QIEMP+D ++VL KGDVLQ
Sbjct: 297 LLDMRIVTEEVVVKNHNAVGKRLAQLKLTDHGCFLNRVIRSQIEMPIDDNVVLNKGDVLQ 356

Query: 358 VSGEKSKVKGLADKIGFISVHSQMADLLAFCSFFILGILFGLVTMTFGQVSFSLGNAVGL 417
           VSG+  +VK +AD+IGFIS+HSQ+ DLLAFC+FF++G++ G++T  F   SF +GNA GL
Sbjct: 357 VSGDARRVKTIADRIGFISIHSQVTDLLAFCAFFVIGLMIGMITFQFSTFSFGMGNAAGL 416

Query: 418 LLSGITLGFLRANHPTFGYVPQGALNMVKDLGLAIFMVGIGLNAGSKMFQHLSEVGVQVI 477
           L +GI LGF+RANHPTFGY+PQGAL+MVK+ GL +FM G+GL+AGS +   L  +G Q++
Sbjct: 417 LFAGIMLGFMRANHPTFGYIPQGALSMVKEFGLMVFMAGVGLSAGSGINNGLGAIGGQML 476

Query: 478 GLAFLVSVVPVVFAYLVGAYILKMNRALLFGAIIGARTCAPAMDVVNEYAKSTIPALGYA 537
               +VS+VPVV  +L GAY+L+MNRALLFGA++GARTCAPAM+++++ A+S IPALGYA
Sbjct: 477 IAGLIVSLVPVVICFLFGAYVLRMNRALLFGAMMGARTCAPAMEIISDTARSNIPALGYA 536

Query: 538 GTYAIANILMTLTGTIFILL 557
           GTYAIAN+L+TL GTI +++
Sbjct: 537 GTYAIANVLLTLAGTIIVMV 556