Pairwise Alignments

Query, 558 a.a., transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 553 a.a., putative transporter from Escherichia coli ECRC62

 Score =  180 bits (457), Expect = 1e-49
 Identities = 150/562 (26%), Positives = 262/562 (46%), Gaps = 39/562 (6%)

Query: 14  ILLIFVVLAIGLSFGKIRFGSFQLGNSIGVLITSLIMGHL----GFSFTPEALTI----G 65
           + ++ +V  +GL  G ++F    LG   GVL   +I+GH     G + + + L +    G
Sbjct: 8   VSILALVAVVGLFIGNVKFRGIGLGIG-GVLFGGIIVGHFVSQAGMTLSSDMLHVIQEFG 66

Query: 66  FMLFIYCVGIEAGPNFFGIFFRDGKHYLILSLVVLITATWIAYFGGYYLNLDYGLAAGMM 125
            +LF+Y +GI+ GP FF      G    + +++++I    +        ++   +  G+ 
Sbjct: 67  LILFVYTIGIQVGPGFFASLRVSGLRLNLFAVLIVIIGGLVTAILHKLFDIPLPVVLGIF 126

Query: 126 AGALTSTPVLVGAQDALNSGLAAVPRHMDLSLILDNVSVGYAMAYLIGLISMIMFAKLLP 185
           +GA+T+TP L   Q  L       P  M     +D + + YAMAY  G+  ++    +L 
Sbjct: 127 SGAVTNTPALGAGQQILRD--LGTPMEM-----VDQMGMSYAMAYPFGICGILFTMWMLR 179

Query: 186 KLQKQNLSDSAQQIAQERGLGSQRKVYLPIIRAYRVGPELINWIDGRNLRELGIYRQTGC 245
            + + N+   AQQ    R  G        +I+   +  E  N  D   ++++ I      
Sbjct: 180 VIFRVNVETEAQQHESSRTNGG------ALIKTINIRVENPNLHD-LAIKDVPILNGDKI 232

Query: 246 YIERIRRHGILAHPDGDAILQEGDEIALVGFP-DSHARLDPSFRNGKEVFDRNL----LD 300
              R++R   L  P  D I+Q GD + LVG P D H   +     G+EV D +L     D
Sbjct: 233 ICSRLKREETLKVPSPDTIIQLGDLLHLVGQPADLH---NAQLVIGQEV-DTSLSTKGTD 288

Query: 301 LRISEEEIVVKSDSIAGKRLSDLNLSE-YGCFLNRVVRAQIEMPMDLDIVLAKGDVLQVS 359
           LR+  E +VV ++++ GKR+ DL+  E Y   ++R+ RA +E+    DI L  GD+L + 
Sbjct: 289 LRV--ERVVVTNENVLGKRIRDLHFKERYDVVISRLNRAGVELVASGDISLQFGDILNLV 346

Query: 360 GEKSKVKGLADKIGFISVHSQMADLLAFCSFFILGILFGLVTMTFG--QVSFSLGNAVGL 417
           G  S +  +A+ +G      Q   +L       LG+L G + +       +  LG A G 
Sbjct: 347 GRPSAIDAVANVLGNAQQKLQQVQMLPVFIGIGLGVLLGSIPVFVPGFPAALKLGLAGGP 406

Query: 418 LLSGITLGFLRANHPTFGYVPQGALNMVKDLGLAIFMVGIGLNAGSKMFQHL-SEVGVQV 476
           L+  + LG + +    + ++P  A   +++LG+ +F+  +GL +G      L +  G+  
Sbjct: 407 LIMALILGRIGSIGKLYWFMPPSANLALRELGIVLFLSVVGLKSGGDFVNTLVNGEGLSW 466

Query: 477 IGLAFLVSVVPVVFAYLVGAYILKMNRALLFGAIIGARTCAPAMDVVNE-YAKSTIPALG 535
           IG   L++ VP++   ++   + KMN   + G + G+ T  PA+   N  +  S   AL 
Sbjct: 467 IGYGALITAVPLITVGILARMLAKMNYLTMCGMLAGSMTDPPALAFANNLHPTSGAAALS 526

Query: 536 YAGTYAIANILMTLTGTIFILL 557
           YA  Y +   L  +T  +  +L
Sbjct: 527 YATVYPLVMFLRIITPQLLAVL 548