Pairwise Alignments

Query, 558 a.a., transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., TrkA C-terminal domain protein from Bacteroides ovatus ATCC 8483

 Score =  169 bits (429), Expect = 2e-46
 Identities = 138/555 (24%), Positives = 249/555 (44%), Gaps = 31/555 (5%)

Query: 14  ILLIFVVLAIGLSFGKIRFGSFQLGNSIGVLITSLIMGHLGFSFTPEAL----TIGFMLF 69
           +L++ + +A G+   KI+     LG +  +L   ++ GH   +     L      G +LF
Sbjct: 23  VLILSLTIAFGIILAKIKVRGVSLGVT-WILFVGIVFGHFNMNLDEHLLHFLKEFGLILF 81

Query: 70  IYCVGIEAGPNFFGIFFRDGKHYLILSLVVLITATWIAYFGGYYLNLDYGLAAGMMAGAL 129
           +Y +G++ GP FF  F + G    +L+++V++    I     +          G+++GA+
Sbjct: 82  VYSIGLQVGPGFFSAFKKGGFTLNMLAMLVVVLGVTITIILHFTTGTPITTMVGILSGAV 141

Query: 130 TSTPVLVGAQDALNSGLAAVPRHMDLSLILDNVSVGYAMAYLIGLISMIMFAKLLPKLQK 189
           T+TP L  AQ A NS L  +            +++GYA++Y +G++ +I+    L  L +
Sbjct: 142 TNTPGLGAAQQA-NSDLNGIDA--------PEIALGYAVSYPLGVVGIILSLLALKYLLR 192

Query: 190 QNLSDSAQQIAQERGLGSQRKVYLPIIRAYRVGPELINW-IDGRNLRELGIYRQTGCYIE 248
            N +   ++   E GLG     +L  +    +  E+ N  +DG  ++EL         I 
Sbjct: 193 INTAQEEKEA--EVGLG-----HLQELTVRPISIEVRNESVDGIRIKELRPLLNRKFVIS 245

Query: 249 RI--RRHGILAHPDGDAILQEGDEIALVGFPDSHARLDPSFRNGKEV-FDRNLLDLRISE 305
           RI  R  G     + + IL  GD I ++  P     +   F  GKE+  +   L+  +  
Sbjct: 246 RIKHREGGETELVNSETILHVGDIILVISTPIDVEAITVFF--GKEIKMEWEQLNKELIS 303

Query: 306 EEIVVKSDSIAGKRLSDLNL-SEYGCFLNRVVRAQIEMPMDLDIVLAKGDVLQVSGEKSK 364
             I++    + GK LS L + + +G  + RV R+ +++     + L  GD + + G +  
Sbjct: 304 RRILITKPELNGKTLSQLKIRNNFGANITRVNRSGVDLVASPQLQLQMGDRVTIVGSELA 363

Query: 365 VKGLADKIGFISVHSQMADLLAFCSFFILGILFGLVTMTFGQVS--FSLGNAVGLLLSGI 422
           V      +G         +L+       LG + G +   F  +     LG A G L+  I
Sbjct: 364 VAHAEKVLGNSMKRLNHPNLIPIFIGIALGCILGSLPFAFPGIPQPVKLGLAGGPLIVSI 423

Query: 423 TLGFLRANHPTFGYVPQGALNMVKDLGLAIFMVGIGLNAGSKMFQHLSEVGVQV-IGLAF 481
            +      +    Y    A  M++++G++IF+  +GL AG      +   G  + +G   
Sbjct: 424 LISRFGPKYKLITYTTMSANLMLREIGISIFLACVGLGAGEGFVDTVIHGGGYIWVGYGV 483

Query: 482 LVSVVPVVFAYLVGAYILKMNRALLFGAIIGARTCAPAMDVVNEYAKSTIPALGYAGTYA 541
           +++++P++   L+G Y  K+N   L G + G+ T  PA+   N+      PA+GYA  Y 
Sbjct: 484 IITILPLLITGLIGRYYCKLNYFTLIGVLAGSTTNPPALAYSNDLTSCDAPAVGYATVYP 543

Query: 542 IANILMTLTGTIFIL 556
           +   L  LT  I IL
Sbjct: 544 LTMFLRVLTAQILIL 558