Pairwise Alignments

Query, 756 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Vibrio cholerae E7946 ATCC 55056

Subject, 756 a.a., Clp protease ClpX from Pseudomonas simiae WCS417

 Score =  996 bits (2576), Expect = 0.0
 Identities = 500/754 (66%), Positives = 612/754 (81%), Gaps = 2/754 (0%)

Query: 1   MLNKELESSLNGAFARARDKRHEFMTVEHLLLALLENDAAREALLACQADIDVLRRELDT 60
           MLN+ELE +LN AF  AR KRHEFMTVEHLLLALL+N+AA   L AC A++D L+ +L  
Sbjct: 1   MLNRELEVTLNLAFKEARSKRHEFMTVEHLLLALLDNEAAATVLRACGANLDKLKHDLQE 60

Query: 61  FIDQTTPLIPKNDETRETQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESHA 120
           FID TTPLIP +DE RETQPTL FQRVLQRAVFHVQSSG+ EVTGANVLVAIFSEQES A
Sbjct: 61  FIDSTTPLIPVHDEDRETQPTLGFQRVLQRAVFHVQSSGKREVTGANVLVAIFSEQESQA 120

Query: 121 AYLLKKNDISRLDIVNFISHGITKASNHSEDSSSDSFGSSDTS-EEVSADERLESFATNL 179
            +LLK+  ++R+D+VN+I+HGI+K   H + S  +     D   E  S+   L+++A+NL
Sbjct: 121 VFLLKQQSVARIDVVNYIAHGISKVPGHGDHSEGEQDMQDDEGGESSSSGNPLDAYASNL 180

Query: 180 NQLAKQGQIDPLIGRDKELERTIQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRIVEGNV 239
           N+LA+QG+IDPL+GR+ E+ER  Q+L RRRKNNPLLVGEAGVGKTAIAEGLA RIV+  V
Sbjct: 181 NELARQGRIDPLVGRELEVERVAQILARRRKNNPLLVGEAGVGKTAIAEGLAKRIVDNQV 240

Query: 240 PEVIQRSVIYSLDIGSLLAGTKYRGDFEKRFKSILKQLEKEKDAILFIDEIHTIIGAGAA 299
           P+++  SV+YSLD+G+LLAGTKYRGDFEKRFK++L +L+K   AILFIDEIHTIIGAGAA
Sbjct: 241 PDLLANSVVYSLDLGALLAGTKYRGDFEKRFKALLGELKKRPQAILFIDEIHTIIGAGAA 300

Query: 300 SGGQVDAANLIKPLLSSGKLRCIGSTTYQEYSNIFEKERALSRRFQKIDIVEPSLDDTTK 359
           SGG +DA+NL+KPLLSSG +RCIGSTT+QE+  IFEK+RAL+RRFQK+D+ EPS++DT  
Sbjct: 301 SGGVMDASNLLKPLLSSGDIRCIGSTTFQEFRGIFEKDRALARRFQKVDVSEPSVEDTIG 360

Query: 360 ILMGLKTKYEAHHDVRYTNKALRAAVELSAKYINERHLPDKAIDVIDEAGARARLMPASR 419
           IL GLK ++EAHH + YT++ALR+A EL+++YIN+RH+PDKAIDVIDEAGA  RL P  +
Sbjct: 361 ILRGLKGRFEAHHGIEYTDEALRSAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPVEK 420

Query: 420 RKKTVGVAEIESMVAKMARIPEKSVSSSDKDILKNLDQKMKMLVFGQDAAIDVLTEAIKL 479
           R K + V ++E +VAK+ARIP K V+SSDK++L+NL++ +K+ VFGQDAAID L+ AIKL
Sbjct: 421 RVKRIDVPQVEDIVAKIARIPPKHVNSSDKELLRNLERDLKLTVFGQDAAIDALSTAIKL 480

Query: 480 TRAGLGAEHKPVGSFLFAGPTGVGKTEVTLQLSKLLGIELLRFDMSEYGERHSVSRLIGA 539
           +RAGL +  KPVGSFLFAGPTGVGKTE   QL+K +GIEL+RFDMSEY ERH+VSRLIGA
Sbjct: 481 SRAGLKSPDKPVGSFLFAGPTGVGKTEAARQLAKAMGIELVRFDMSEYMERHTVSRLIGA 540

Query: 540 PPGYVGYDQGGLLTDAVIKHPHSVVLLDEIEKAHPDIFNLLLQVMDNGTLTDNNGRKADF 599
           PPGYVG+DQGGLLT+A+ K PH V+LLDEIEKAHP++FNLLLQVMD+GTLTDNNGRKADF
Sbjct: 541 PPGYVGFDQGGLLTEAITKQPHCVLLLDEIEKAHPEVFNLLLQVMDHGTLTDNNGRKADF 600

Query: 600 RNVILVMTTNAGVAETVKKSIGLIQQDNSHDAMSEIKKVFTPEFRNRLDHIIWFNSLDER 659
           RNVI++MTTNAG     + SIG   QD+S DAM  IKK FTPEFRNRLD II F  L   
Sbjct: 601 RNVIVIMTTNAGAETAARASIGFSHQDHSSDAMEVIKKSFTPEFRNRLDTIIQFGRLSHE 660

Query: 660 VIHQVVDKFIVELQAQLDARGVSLEVSEDARHWLAVKGYDREMGARPMGRVIQEQLKKPL 719
           VI  VVDKF+ ELQAQL+ + V LEV++ AR WLA  GYD  MGARPM R+IQ+++K+PL
Sbjct: 661 VIKSVVDKFLTELQAQLEDKRVQLEVTDAARSWLAQGGYDAAMGARPMARLIQDKIKRPL 720

Query: 720 ANELLFGSLVD-GGTVKVTLSDDRLAFEYFGTRE 752
           A E+LFG L D GG V + L D  L FE+  T E
Sbjct: 721 AEEILFGELSDHGGVVHIDLKDGELTFEFETTAE 754