Pairwise Alignments

Query, 756 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Vibrio cholerae E7946 ATCC 55056

Subject, 773 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Sphingobium sp. HT1-2

 Score =  871 bits (2250), Expect = 0.0
 Identities = 443/753 (58%), Positives = 581/753 (77%), Gaps = 22/753 (2%)

Query: 6   LESSLNGAFARARDKRHEFMTVEHLLLALLENDAAREALLACQADI----DVLRRELDTF 61
           LE++L+ A   A +++HE+ T+EHLLLAL++++ A + + AC  ++    D + + LDT 
Sbjct: 8   LETTLHNALTHASERKHEYATLEHLLLALIDDEHASKVMQACGVELGELADAVTQYLDTE 67

Query: 62  IDQTTPLIPKNDETRETQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESHAA 121
           +D       K +   +  PT  FQRV+QRA+ HVQSSG+ EVTGANVLVA+FSE+ES+A 
Sbjct: 68  LDSL-----KVEGASDPSPTSGFQRVVQRAILHVQSSGKDEVTGANVLVALFSERESYAV 122

Query: 122 YLLKKNDISRLDIVNFISHGITKASNHSEDSSSDSFGSSDTSEEVS-----ADERLESFA 176
           Y L++ D+SRLD V++ISHG+ K +   E    ++ G+++  ++V       D  LE F 
Sbjct: 123 YFLQQQDMSRLDAVSYISHGVGKGTPTPE--RQETKGAAEEEKKVQDGKGKKDSALEQFT 180

Query: 177 TNLNQLAKQGQIDPLIGRDKELERTIQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRIVE 236
            NLN+ A++G++DPLIGR  E++RTIQ+LCRR KNNPL VG+ GVGKTAIAEGLA +IVE
Sbjct: 181 VNLNEKAERGKVDPLIGRSSEVDRTIQILCRRSKNNPLYVGDPGVGKTAIAEGLARKIVE 240

Query: 237 GNVPEVIQRSVIYSLDIGSLLAGTKYRGDFEKRFKSILKQLEKEKDAILFIDEIHTIIGA 296
           G VP+V++ +VIYSLD+G+LLAGT+YRGDFE+R K+++ +LEK   A+LFIDEIHT+IGA
Sbjct: 241 GEVPDVLKEAVIYSLDMGALLAGTRYRGDFEERLKAVVTELEKMPHAVLFIDEIHTVIGA 300

Query: 297 GAASGGQVDAANLIKPLLSSGKLRCIGSTTYQEYSNIFEKERALSRRFQKIDIVEPSLDD 356
           GA SGG +DA+NL+KP LS G +RCIGSTTY+E+ N FEK+RAL RRFQKID+ EPS++D
Sbjct: 301 GATSGGAMDASNLLKPALSGGTIRCIGSTTYKEFRNHFEKDRALLRRFQKIDVNEPSVED 360

Query: 357 TTKILMGLKTKYEAHHDVRYTNKALRAAVELSAKYINERHLPDKAIDVIDEAGARARLMP 416
           T KIL GL+T +E HH V+YT  A++AAVELSA+YIN+R LPDKAIDVIDE GA   L+ 
Sbjct: 361 TIKILTGLRTAFEEHHHVKYTPDAIKAAVELSARYINDRKLPDKAIDVIDEVGAMQMLVV 420

Query: 417 ASRRKKTVGVAEIESMVAKMARIPEKSVSSSDKDILKNLDQKMKMLVFGQDAAIDVLTEA 476
            S+RKKT+   EIE+++A MARIP K+VSS DK +L++L   +K +VFGQD AI+VL+ A
Sbjct: 421 PSKRKKTITPKEIEAVIATMARIPPKTVSSDDKSVLESLTTDLKRVVFGQDQAIEVLSSA 480

Query: 477 IKLTRAGLGAEHKPVGSFLFAGPTGVGKTEVTLQLSKLLGIELLRFDMSEYGERHSVSRL 536
           IKL+RAGL    KP+G++LF+GPTGVGKTEV  QL+ LLGI L RFDMSEY ERHSVSRL
Sbjct: 481 IKLSRAGLRDPDKPIGNYLFSGPTGVGKTEVARQLATLLGIPLQRFDMSEYMERHSVSRL 540

Query: 537 IGAPPGYVGYDQGGLLTDAVIKHPHSVVLLDEIEKAHPDIFNLLLQVMDNGTLTDNNGRK 596
           IGAPPGYVGYDQGGLLTDAV + PHSV+LLDEIEKAHPD+FN+LLQVMDNG LTD++G+ 
Sbjct: 541 IGAPPGYVGYDQGGLLTDAVDQQPHSVLLLDEIEKAHPDLFNILLQVMDNGRLTDHHGKT 600

Query: 597 ADFRNVILVMTTNAGVAETVKKSIG---LIQQDNSHDAMSEIKKVFTPEFRNRLDHIIWF 653
            DFRN IL+MTTNAG ++  K+SIG   L ++D   DA   +KK+FTPEFRNRLD I+ F
Sbjct: 601 VDFRNTILIMTTNAGASDMAKESIGFGELTREDVQEDA---VKKLFTPEFRNRLDAIVPF 657

Query: 654 NSLDERVIHQVVDKFIVELQAQLDARGVSLEVSEDARHWLAVKGYDREMGARPMGRVIQE 713
             L   ++ +V+DKF+++L+ QL  R V + + EDA+ WL  KGYD+  GARPMGR++QE
Sbjct: 658 GYLPPEIVARVIDKFVLQLELQLADRDVHITLDEDAKAWLTKKGYDKLYGARPMGRLMQE 717

Query: 714 QLKKPLANELLFGSLVDGGTVKVTLSDDRLAFE 746
           ++K+PLA ELLFG LV GG V V + D+ LAF+
Sbjct: 718 KIKQPLAEELLFGKLVHGGEVHVHMKDEALAFQ 750