Pairwise Alignments

Query, 756 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Vibrio cholerae E7946 ATCC 55056

Subject, 756 a.a., ATP-dependent serine protease from Pseudomonas putida KT2440

 Score =  999 bits (2583), Expect = 0.0
 Identities = 498/754 (66%), Positives = 616/754 (81%), Gaps = 2/754 (0%)

Query: 1   MLNKELESSLNGAFARARDKRHEFMTVEHLLLALLENDAAREALLACQADIDVLRRELDT 60
           MLN+ELE +LN AF  AR KRHEFMTVEHLLLALL+N+AA   L AC A++D L+ +L  
Sbjct: 1   MLNRELEVTLNLAFKEARSKRHEFMTVEHLLLALLDNEAAATVLRACGANLDKLKHDLQE 60

Query: 61  FIDQTTPLIPKNDETRETQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESHA 120
           FID TTPLIP NDE RETQPTL FQRVLQRAVFHVQSSG+ EVTGANVLVAIFSEQES A
Sbjct: 61  FIDSTTPLIPVNDEDRETQPTLGFQRVLQRAVFHVQSSGKREVTGANVLVAIFSEQESQA 120

Query: 121 AYLLKKNDISRLDIVNFISHGITKASNHSEDSSSDSFGSSDTSEEVSADER-LESFATNL 179
            +LLK+  ++R+D+VN+I+HGI+K   H   S S+     D   E S+    L+++A+NL
Sbjct: 121 VFLLKQQSVARIDVVNYIAHGISKVPGHGAQSESEQDMQDDEGGETSSSSNPLDAYASNL 180

Query: 180 NQLAKQGQIDPLIGRDKELERTIQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRIVEGNV 239
           N+LA+ G+IDPL+GR++E+ER  Q+L RRRKNNPLLVGEAGVGKTAIAEGLA RIV+G V
Sbjct: 181 NELARAGRIDPLVGREQEVERVAQILARRRKNNPLLVGEAGVGKTAIAEGLAKRIVDGQV 240

Query: 240 PEVIQRSVIYSLDIGSLLAGTKYRGDFEKRFKSILKQLEKEKDAILFIDEIHTIIGAGAA 299
           P+++ +SV+YSLD+G+LLAGTKYRGDFEKRFK++L +L K   AILFIDEIHTIIGAGAA
Sbjct: 241 PDLLAQSVVYSLDLGALLAGTKYRGDFEKRFKALLGELRKRPQAILFIDEIHTIIGAGAA 300

Query: 300 SGGQVDAANLIKPLLSSGKLRCIGSTTYQEYSNIFEKERALSRRFQKIDIVEPSLDDTTK 359
           SGG +DA+NL+KPLLSSG++RCIGSTT+QE+  IFEK+RAL+RRFQK+D+ EPS++DT  
Sbjct: 301 SGGVMDASNLLKPLLSSGEIRCIGSTTFQEFRGIFEKDRALARRFQKVDVSEPSVEDTVG 360

Query: 360 ILMGLKTKYEAHHDVRYTNKALRAAVELSAKYINERHLPDKAIDVIDEAGARARLMPASR 419
           IL GLK ++E+HH++ Y+++ALRAA EL+++YIN+RH+PDKAIDVIDEAGA  RL P + 
Sbjct: 361 ILRGLKGRFESHHNIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPEAS 420

Query: 420 RKKTVGVAEIESMVAKMARIPEKSVSSSDKDILKNLDQKMKMLVFGQDAAIDVLTEAIKL 479
           R K + V ++E +VAK+ARIP K V+SSDK++L+NL++ +K+ VFGQD AID L  AIKL
Sbjct: 421 RVKRIDVPQVEDIVAKIARIPPKHVTSSDKELLRNLERDLKLTVFGQDQAIDSLATAIKL 480

Query: 480 TRAGLGAEHKPVGSFLFAGPTGVGKTEVTLQLSKLLGIELLRFDMSEYGERHSVSRLIGA 539
           +RAGL +  KPVGSFLFAGPTGVGKTE   QL+K LG+EL+RFDMSEY ERH+VSRLIGA
Sbjct: 481 SRAGLKSPDKPVGSFLFAGPTGVGKTEAARQLAKALGVELVRFDMSEYMERHTVSRLIGA 540

Query: 540 PPGYVGYDQGGLLTDAVIKHPHSVVLLDEIEKAHPDIFNLLLQVMDNGTLTDNNGRKADF 599
           PPGYVG+DQGGLLT+A+ K PH V+LLDEIEKAHP++FNLLLQVMD+GTLTDNNGRKADF
Sbjct: 541 PPGYVGFDQGGLLTEAITKQPHCVLLLDEIEKAHPEVFNLLLQVMDHGTLTDNNGRKADF 600

Query: 600 RNVILVMTTNAGVAETVKKSIGLIQQDNSHDAMSEIKKVFTPEFRNRLDHIIWFNSLDER 659
           RNVIL+MTTNAG     + SIG   QD++ DAM  I+K FTPEFRNRLD II F  L   
Sbjct: 601 RNVILIMTTNAGAETAARASIGFTHQDHASDAMEVIRKSFTPEFRNRLDTIIQFGRLSTE 660

Query: 660 VIHQVVDKFIVELQAQLDARGVSLEVSEDARHWLAVKGYDREMGARPMGRVIQEQLKKPL 719
            I  +VDKF++ELQAQL+ + V LEVS++AR WLAV GYD +MGARPM R+IQ+++K+PL
Sbjct: 661 TIKSIVDKFLIELQAQLEDKRVLLEVSDEARGWLAVSGYDVQMGARPMARLIQDKIKRPL 720

Query: 720 ANELLFGSLVD-GGTVKVTLSDDRLAFEYFGTRE 752
           A E+LFG L + GG V V L D  L F++  T E
Sbjct: 721 AEEILFGELAEHGGVVHVDLRDGELVFDFETTAE 754