Pairwise Alignments

Query, 756 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Vibrio cholerae E7946 ATCC 55056

Subject, 940 a.a., putative Chaperone-associated ATPase from Pseudomonas putida KT2440

 Score =  498 bits (1281), Expect = e-145
 Identities = 302/817 (36%), Positives = 470/817 (57%), Gaps = 92/817 (11%)

Query: 2   LNKELESSLNGAFARARDKRHEFMTVEHLLLALLENDAAREALLACQADIDVLRRELDTF 61
           +++  E+ L  A  RA +     +  EHLLLAL ++D  +  L   +  +D L+R+++  
Sbjct: 129 ISEHSEALLQEAAKRATEFGRSEVDTEHLLLALADSDVVKTILSQFKIKVDELKRQIEAE 188

Query: 62  IDQTTPLIPKNDETRETQPTLS--FQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESH 119
                    + D+  E +  +S   +  L RA       G + V   + L+ +  E E  
Sbjct: 189 AK-------RGDKPFEGEVGVSPRVKDALSRAFVASNELGHAYVGPEHFLIGLAEEGEGL 241

Query: 120 AAYLLKKNDISRLDIVNFISHGITKASNHSEDSSSDSFGSSDTSEEVSADERLESFATNL 179
           AA LL++  +    +   +S  + K +   ED  +++   ++T E       L+ ++ +L
Sbjct: 242 AANLLRRYGLMPQALRQCVSKVVGKGA---EDGRAEA--PTETPE-------LDKYSRDL 289

Query: 180 NQLAKQGQIDPLIGRDKELERTIQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRIVEGNV 239
            ++A+ G++DP+IGR +E+E TI+VL RR+KNNP+L+GE GVGKTAI EGLA R+V G V
Sbjct: 290 TRMARDGKLDPVIGRAQEIETTIEVLARRKKNNPVLIGEPGVGKTAIVEGLAQRMVAGEV 349

Query: 240 PEVIQRSVIYSLDIGSLLAGTKYRGDFEKRFKSILKQL-EKEKDAILFIDEIHTIIGAGA 298
           PE ++   +  L+I SL+AG KYRG+FE+R + +LK++ E + + ILFIDE+HTI+GAG 
Sbjct: 350 PETLRDKRLVELNINSLVAGAKYRGEFEERVQKVLKEIAEHQGELILFIDEVHTIVGAGQ 409

Query: 299 ASG-GQVDAANLIKPLLSSGKLRCIGSTTYQEYSNIFEKERALSRRFQKIDIVEPSLDDT 357
             G G +D AN+ KP+++ G+L  IG+TT  EY    E++ AL RRFQ + + EP++  T
Sbjct: 410 GGGEGGLDVANVFKPMMARGELNLIGATTLNEYQKYIEQDAALERRFQPVVVPEPTVAQT 469

Query: 358 TKILMGLKTKYEAHHDVRYTNKALRAAVELSAKYINERHLPDKAIDVIDEAGARARLMPA 417
             IL GL+  +EAHH V  T +A+ AA ELS +Y++ R LPDKAID++D+A AR +L   
Sbjct: 470 IMILRGLRDTFEAHHKVSITEEAIIAAAELSDRYVSARFLPDKAIDLLDQAAARVKLSAT 529

Query: 418 SR----------------------------------------------------RKKTVG 425
           +R                                                    R++  G
Sbjct: 530 ARPVAVQEMESELHQLRREQDYAASRKQYDNAAQISKRVEATEAELKQRVEEWERERGSG 589

Query: 426 VAEIES-----MVAKMARIPEKSVSSSDKDILKNLDQKMKMLVFGQDAAIDVLTEAIKLT 480
             E+++     +V+++  IP   ++  +++ L +L+Q++   + GQD A+  + +A++L+
Sbjct: 590 STEVKAEHVAQIVSRLTGIPVNELTVEEREKLLHLEQRLHERLVGQDEAVRAVADAVRLS 649

Query: 481 RAGLGAEHKPVGSFLFAGPTGVGKTEVTLQLSKLL-GIE--LLRFDMSEYGERHSVSRLI 537
           RAGL    KPV +FLF G TGVGKTE+   L++ + G E  LLR DMSEYGERHSV+RL+
Sbjct: 650 RAGLREGSKPVATFLFLGSTGVGKTELAKALAETIYGDESALLRIDMSEYGERHSVARLV 709

Query: 538 GAPPGYVGYDQGGLLTDAVIKHPHSVVLLDEIEKAHPDIFNLLLQVMDNGTLTDNNGRKA 597
           GAPPGYVGYD+GG LT+ V + P+SV+LLDEIEKAH D++N+LLQV D+G LTD  GR  
Sbjct: 710 GAPPGYVGYDEGGQLTEKVRRKPYSVLLLDEIEKAHADVYNILLQVFDDGRLTDGKGRVV 769

Query: 598 DFRNVILVMTTNAGVAETVKKSI------GLIQQDNSHDAMSEIKKVFTPEFRNRLDHII 651
           DF N I++ T+N G ++ +++ +      G   +    + M  ++  F PEF NR+D II
Sbjct: 770 DFTNTIIIATSNLG-SDIIQRRLKAPGAAGEEYEKTKVEVMEVLRGHFRPEFLNRIDEII 828

Query: 652 WFNSLDERVIHQVVDKFIVELQAQLDARGVSLEVSEDARHWLAVKGYDREMGARPMGRVI 711
            F++L ++ I  +V   +  +     ++GV+L   E     LA  GY  E GAR + R+I
Sbjct: 829 VFHALGKQEIRHIVGLQLERVARNAASQGVTLTFDETLVDHLAQVGYKPEFGARELKRLI 888

Query: 712 QEQLKKPLANELLFGSLVDGGTVKVTLSD--DRLAFE 746
           + +L+  LA E+L G +  G    V   D  +R+ F+
Sbjct: 889 RSELETALAREMLGGGIGKGDHAHVRWDDKAERVGFD 925