Pairwise Alignments

Query, 756 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Vibrio cholerae E7946 ATCC 55056

Subject, 872 a.a., ATP-dependent chaperone ClpB from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  282 bits (722), Expect = 5e-80
 Identities = 165/413 (39%), Positives = 252/413 (61%), Gaps = 26/413 (6%)

Query: 7   ESSLNGAFARARDKRHEFMTVEHLLLALLENDAAREALLACQADIDVLRRELDTFIDQTT 66
           + ++  A   A   + + +   H+L A+LE D      L  + +I+     L + +D+  
Sbjct: 11  QEAIQKATEIAGGNQQQAIETGHILKAILETDENVTNFLLQKLNIN--GNILHSKLDEVV 68

Query: 67  PLIPKNDETRETQPTLSFQRV--LQRAVFHVQSSGRSEVTGANVLVAIFSEQESHAAYLL 124
              PK        P L+      LQ+A  +++  G   V   ++L+ + + ++  A  L+
Sbjct: 69  AAYPK---VSGGSPYLANDAAAALQKATAYLKEFGDEYVAIEHMLLGLLAGRDKVAG-LM 124

Query: 125 KKNDISRLDIVNFISH--GITKASNHSEDSSSDSFGSSDTSEEVSADERLESFATNLNQL 182
           K    +  D+   I    G  K ++ + ++  +S               L+ +A NLN+L
Sbjct: 125 KDVGFNEKDLKKAIKELRGGAKVTDQNAEAKYNS---------------LKRYAKNLNEL 169

Query: 183 AKQGQIDPLIGRDKELERTIQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRIVEGNVPEV 242
           A+ G+IDP+IGRD+E+ R +Q+L RR KNNP+L+GE GVGKTAI EGLA R+V G+VPE 
Sbjct: 170 ARAGKIDPVIGRDEEIRRVLQILSRRTKNNPVLLGEPGVGKTAIVEGLAQRMVSGDVPEN 229

Query: 243 IQRSVIYSLDIGSLLAGTKYRGDFEKRFKSILKQL-EKEKDAILFIDEIHTIIGAGAASG 301
           ++   + SLD+G L+AG KY+G+FE+R K+++K++ + E + ILFIDEIHT+IGAGA   
Sbjct: 230 LKNKTLMSLDMGLLVAGAKYKGEFEERLKAVIKEVTDAEGEIILFIDEIHTLIGAGAGGE 289

Query: 302 GQVDAANLIKPLLSSGKLRCIGSTTYQEYSNIFEKERALSRRFQKIDIVEPSLDDTTKIL 361
             +DAANL+KP L+ G+L  IG+TT +EY    EK++AL RRFQ + + EPS+ D   IL
Sbjct: 290 SAMDAANLLKPALARGELHAIGATTLKEYQKYIEKDKALERRFQAVMVDEPSVPDAISIL 349

Query: 362 MGLKTKYEAHHDVRYTNKALRAAVELSAKYINERHLPDKAIDVIDEAGARARL 414
            G+K KYE HH VR  + A+ A+VELS +YI++R LPDKAID++DEA A+ R+
Sbjct: 350 RGIKDKYELHHGVRIKDDAIIASVELSNRYISDRFLPDKAIDLMDEAAAKLRI 402



 Score =  266 bits (679), Expect = 4e-75
 Identities = 138/335 (41%), Positives = 212/335 (63%), Gaps = 10/335 (2%)

Query: 421 KKTVGVAEIESMVAKMARIPEKSVSSSDKDILKNLDQKMKMLVFGQDAAIDVLTEAIKLT 480
           K+ V   +I  +VAK   IP   +  SD++ L +L+Q++   V GQ+ AI+ +++A++ +
Sbjct: 527 KEEVNAEDIAEVVAKWTGIPVSKMLQSDREKLLHLEQELGKRVAGQEEAIEAISDAVRRS 586

Query: 481 RAGLGAEHKPVGSFLFAGPTGVGKTEVTLQLSKLLGIE---LLRFDMSEYGERHSVSRLI 537
           RAG+    +P+GSF+F G TGVGKTE+   L+  L  +   ++R DMSEY ERH+VSRLI
Sbjct: 587 RAGMQDPKRPIGSFIFLGTTGVGKTELAKALADYLFNDDNAMVRIDMSEYQERHAVSRLI 646

Query: 538 GAPPGYVGYDQGGLLTDAVIKHPHSVVLLDEIEKAHPDIFNLLLQVMDNGTLTDNNGRKA 597
           GAPPGYVGYD+GG LT+A+ + P+SVVLLDEIEKAHPD+FN+LLQV+D+G LTD+ GR  
Sbjct: 647 GAPPGYVGYDEGGQLTEAIRRKPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVV 706

Query: 598 DFRNVILVMTTNAG---VAETVKKSIGL----IQQDNSHDAMSEIKKVFTPEFRNRLDHI 650
           +F+N I++MT+N G   +    +K   L    + +    +    +KK   PEF NR+D +
Sbjct: 707 NFKNTIIIMTSNIGSHIIQSNFEKMTPLNHDEVIEQTKEEVFDLLKKSVRPEFLNRIDEL 766

Query: 651 IWFNSLDERVIHQVVDKFIVELQAQLDARGVSLEVSEDARHWLAVKGYDREMGARPMGRV 710
           + F  L    I ++V+     +Q +L+  G+ L  +++   +L  +G+D + GARP+ RV
Sbjct: 767 VMFRPLSRGDIRKIVNIQFRHIQQRLEEAGIQLVATDEVLDYLGEQGFDPQFGARPLKRV 826

Query: 711 IQEQLKKPLANELLFGSLVDGGTVKVTLSDDRLAF 745
           IQ Q+   L+ E+L G +     V+  L   ++ F
Sbjct: 827 IQRQVLNELSKEILSGKINKDSVVEAVLDGGKIRF 861