Pairwise Alignments

Query, 756 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Vibrio cholerae E7946 ATCC 55056

Subject, 865 a.a., Clp protease ClpC from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  532 bits (1370), Expect = e-155
 Identities = 314/806 (38%), Positives = 485/806 (60%), Gaps = 98/806 (12%)

Query: 22  HEFMTVEHLLLALL-ENDAAREALLA-CQADIDVLRRELD----TFIDQTTPLIPKNDET 75
           H+++  EHL+L ++ E +    ALL      ID L+  L+        Q++ +      T
Sbjct: 25  HDYIGTEHLVLGMIREGEGTAVALLKKLGVSIDELKYALEQATRNTASQSSNITGSIPLT 84

Query: 76  RETQPTLSFQRVLQRAVFHVQSSGRSEVTGA-NVLVAIFSEQESHAAYLLKKNDISRLDI 134
           ++T+  L     L+  +F      +S++ G  ++L++I  ++++ ++ +L K +++   I
Sbjct: 85  KQTEKVLKIT-YLEAKIF------KSDIIGTEHLLLSILRDEDNISSQILGKFNVNYEAI 137

Query: 135 VNFIS-HGITKASNHSEDSSSDS---FGSSDTSEEVSADER---------LESFATNLNQ 181
            + +  H     ++   D S DS   FGSS +    S+ ++         L++F  +L +
Sbjct: 138 RDSLDYHSNNPLASSDTDDSDDSDKLFGSSSSRSGSSSSKKPGEKSRTPVLDNFGRDLTK 197

Query: 182 LAKQGQIDPLIGRDKELERTIQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRIVEGNVPE 241
           LA+  ++DP++GR+KE+ER  QVL RR+KNNP+L+GE GVGKTAIAEGLA RIV+  V  
Sbjct: 198 LAEDDKLDPIVGREKEIERVAQVLSRRKKNNPILIGEPGVGKTAIAEGLALRIVQKKVSR 257

Query: 242 VIQRSVIYSLDIGSLLAGTKYRGDFEKRFKSILKQLEKEKDAILFIDEIHTIIGAGAASG 301
           V+    + +LD+ SL+AGTKYRG FE+R K+++ +LEK  D ILFIDE+HTI+GAG AS 
Sbjct: 258 VLFNKRVVTLDLASLVAGTKYRGQFEERMKAVMNELEKSPDVILFIDELHTIVGAGGAS- 316

Query: 302 GQVDAANLIKPLLSSGKLRCIGSTTYQEYSNIFEKERALSRRFQKIDIVEPSLDDTTKIL 361
           G +DA+N+ KP L+ G+++CIG+TT  EY    EK+ AL+RRFQ + +   + ++T +IL
Sbjct: 317 GSLDASNMFKPALARGEIQCIGATTLDEYRQYIEKDGALARRFQIVMVDPTTPEETIEIL 376

Query: 362 MGLKTKYEAHHDVRYTNKALRAAVELSAKYINERHLPDKAIDVIDEAGARARL----MPA 417
             +K KY+ HH V YT+KA+ A V+LS +Y+++R LPDKAID++DEAGAR  +    +P 
Sbjct: 377 NNIKDKYQDHHHVNYTDKAIEACVKLSDRYMSDRFLPDKAIDILDEAGARVHINNIVVPD 436

Query: 418 SRRKKTVGVAEI---ESMVAKMARIPEKS-VSSSDKDILKNLD----------------- 456
              K    +  I   ++ V K  +  E + +   +K ++  LD                 
Sbjct: 437 DILKLEEQIENIKVEKNRVVKSQKYEEAAQLRDKEKKLIDQLDSAKKNWEEETKKKRYQV 496

Query: 457 --------------------------------QKMKMLVFGQDAAIDVLTEAIKLTRAGL 484
                                           +++K  V GQD AI  L +AI+ TR GL
Sbjct: 497 KEENVAEVIAMMTGIPVKRIAQKEGVKLLNMGEELKGKVIGQDKAIGQLVKAIQRTRVGL 556

Query: 485 GAEHKPVGSFLFAGPTGVGKTEVTLQLSKLL---GIELLRFDMSEYGERHSVSRLIGAPP 541
               KP+GSF+F GPTGVGKTE+   L+  L      L+R DMSEY E+ SVSRL+GAPP
Sbjct: 557 KDPKKPIGSFVFLGPTGVGKTELAKVLATYLFDKEDSLVRIDMSEYMEKFSVSRLVGAPP 616

Query: 542 GYVGYDQGGLLTDAVIKHPHSVVLLDEIEKAHPDIFNLLLQVMDNGTLTDNNGRKADFRN 601
           GYVGY++GG LT+ + + P+SVVLLDEIEKAHPD++NLLLQV+D+G LTD  GRK DFRN
Sbjct: 617 GYVGYEEGGQLTEKIRRKPYSVVLLDEIEKAHPDVYNLLLQVLDDGILTDGLGRKVDFRN 676

Query: 602 VILVMTTNAGVAETVKKSIGL-----IQQDNSHDAM-----SEIKKVFTPEFRNRLDHII 651
            I++MT+N G  +      G+      +Q+N  D M     S +KK F+PEF NRLD +I
Sbjct: 677 TIIIMTSNIGARDLQDFGAGIGFMSKSKQENVDDIMKGTIASALKKTFSPEFLNRLDDVI 736

Query: 652 WFNSLDERVIHQVVDKFIVELQAQLDARGVSLEVSEDARHWLAVKGYDREMGARPMGRVI 711
            FNSL+   +H++++  + +L  ++++ G ++E++++A+ ++A KGYD + GARP+ R I
Sbjct: 737 VFNSLNREDMHKIIELSLSKLFTRVESLGYTIELTKEAKDFVAEKGYDPKYGARPLNRAI 796

Query: 712 QEQLKKPLANELLFGSLVDGGTVKVT 737
           Q+ ++ P+A E+L   +  G  ++V+
Sbjct: 797 QKYIEDPIAEEILKAEVNQGDVIQVS 822