Pairwise Alignments

Query, 756 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Vibrio cholerae E7946 ATCC 55056

Subject, 758 a.a., ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity (NCBI) from Escherichia coli BW25113

 Score = 1155 bits (2988), Expect = 0.0
 Identities = 588/748 (78%), Positives = 663/748 (88%), Gaps = 5/748 (0%)

Query: 1   MLNKELESSLNGAFARARDKRHEFMTVEHLLLALLENDAAREALLACQADIDVLRRELDT 60
           MLN+ELE SLN AFARAR+ RHEFMTVEHLLLALL N +AREAL AC  D+  LR+EL+ 
Sbjct: 1   MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60

Query: 61  FIDQTTPLIPKNDETRETQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESHA 120
           FI+QTTP++P ++E R+TQPTLSFQRVLQRAVFHVQSSGR+EVTGANVLVAIFSEQES A
Sbjct: 61  FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120

Query: 121 AYLLKKNDISRLDIVNFISHGITKASNHSEDSSSDSFGSSDTSEE-VSADERLESFATNL 179
           AYLL+K+++SRLD+VNFISHG  K     E + S   GS   SEE    +ER+E+F TNL
Sbjct: 121 AYLLRKHEVSRLDVVNFISHGTRK----DEPTQSSDPGSQPNSEEQAGGEERMENFTTNL 176

Query: 180 NQLAKQGQIDPLIGRDKELERTIQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRIVEGNV 239
           NQLA+ G IDPLIGR+KELER IQVLCRRRKNNPLLVGE+GVGKTAIAEGLAWRIV+G+V
Sbjct: 177 NQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDV 236

Query: 240 PEVIQRSVIYSLDIGSLLAGTKYRGDFEKRFKSILKQLEKEKDAILFIDEIHTIIGAGAA 299
           PEV+    IYSLDIGSLLAGTKYRGDFEKRFK++LKQLE++ ++ILFIDEIHTIIGAGAA
Sbjct: 237 PEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAA 296

Query: 300 SGGQVDAANLIKPLLSSGKLRCIGSTTYQEYSNIFEKERALSRRFQKIDIVEPSLDDTTK 359
           SGGQVDAANLIKPLLSSGK+R IGSTTYQE+SNIFEK+RAL+RRFQKIDI EPS+++T +
Sbjct: 297 SGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQ 356

Query: 360 ILMGLKTKYEAHHDVRYTNKALRAAVELSAKYINERHLPDKAIDVIDEAGARARLMPASR 419
           I+ GLK KYEAHHDVRYT KA+RAAVEL+ KYIN+RHLPDKAIDVIDEAGARARLMP S+
Sbjct: 357 IINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSK 416

Query: 420 RKKTVGVAEIESMVAKMARIPEKSVSSSDKDILKNLDQKMKMLVFGQDAAIDVLTEAIKL 479
           RKKTV VA+IES+VA++ARIPEKSVS SD+D LKNL  ++KMLVFGQD AI+ LTEAIK+
Sbjct: 417 RKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKM 476

Query: 480 TRAGLGAEHKPVGSFLFAGPTGVGKTEVTLQLSKLLGIELLRFDMSEYGERHSVSRLIGA 539
            RAGLG EHKPVGSFLFAGPTGVGKTEVT+QLSK LGIELLRFDMSEY ERH+VSRLIGA
Sbjct: 477 ARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGA 536

Query: 540 PPGYVGYDQGGLLTDAVIKHPHSVVLLDEIEKAHPDIFNLLLQVMDNGTLTDNNGRKADF 599
           PPGYVG+DQGGLLTDAVIKHPH+V+LLDEIEKAHPD+FN+LLQVMDNGTLTDNNGRKADF
Sbjct: 537 PPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADF 596

Query: 600 RNVILVMTTNAGVAETVKKSIGLIQQDNSHDAMSEIKKVFTPEFRNRLDHIIWFNSLDER 659
           RNV+LVMTTNAGV ET +KSIGLI QDNS DAM EIKK+FTPEFRNRLD+IIWF+ L   
Sbjct: 597 RNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTD 656

Query: 660 VIHQVVDKFIVELQAQLDARGVSLEVSEDARHWLAVKGYDREMGARPMGRVIQEQLKKPL 719
           VIHQVVDKFIVELQ QLD +GVSLEVS++AR+WLA KGYDR MGARPM RVIQ+ LKKPL
Sbjct: 657 VIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPL 716

Query: 720 ANELLFGSLVDGGTVKVTLSDDRLAFEY 747
           ANELLFGSLVDGG V V L  ++    Y
Sbjct: 717 ANELLFGSLVDGGQVTVALDKEKNELTY 744