Pairwise Alignments

Query, 756 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Vibrio cholerae E7946 ATCC 55056

Subject, 745 a.a., AAA family ATPase from Phocaeicola dorei CL03T12C01

 Score =  598 bits (1542), Expect = e-175
 Identities = 336/743 (45%), Positives = 475/743 (63%), Gaps = 17/743 (2%)

Query: 9   SLNGAFARARDK----RHEFMTVEHLLLALLENDAAREALLACQADIDVLRRELDTFIDQ 64
           S+N AFA A+ +    RHEF+T EHLL ALL+    ++AL  C    + L + +  ++ +
Sbjct: 8   SVNYAFASAQSQAMQYRHEFITPEHLLSALLKQVPFQKALAECFCTPEELSQSISEYLSK 67

Query: 65  TTPLIPKNDETRETQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESHAAYLL 124
               +P+  E  E + +     +LQ A   +  S   E+   +++  +   ++S A YLL
Sbjct: 68  EVERVPQEIEY-ELEISGQLSELLQYAYMTISHSSAEEMDVPHLVQGMLQLEDSWAGYLL 126

Query: 125 KKNDISRLDIVNFISHGITKASNHSEDSSSDSFGSSDTSEEVSADERLESFATNLNQLAK 184
           KK      D+  F+S   T  SN+   +        +TS E    E   ++ T LN+  +
Sbjct: 127 KKTVGE--DMPEFLS---TLISNYEHMNQFQE----ETSSEQEKSEPWRNYVTCLNEGLQ 177

Query: 185 QGQIDPLIGRDKELERTIQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRIVEGNVPEVIQ 244
               +PLIGRD ELERTIQVLCR+ KNNPL VGE GVGKTA+A GLA RI  GNVPE + 
Sbjct: 178 DR--NPLIGRDVELERTIQVLCRKEKNNPLHVGEPGVGKTALAYGLAARIEAGNVPERLT 235

Query: 245 RSVIYSLDIGSLLAGTKYRGDFEKRFKSILKQLEKEKDAILFIDEIHTIIGAGAASGGQV 304
              IY LD+G+LLAGT+YRG+FEKR K+I++ + KE  AI++IDEIH +IGAG    G +
Sbjct: 236 GCRIYELDLGNLLAGTQYRGEFEKRLKAIMEGIRKEGHAIVYIDEIHNLIGAGRTGDGSM 295

Query: 305 DAANLIKPLLSSGKLRCIGSTTYQEYSNIFEKERALSRRFQKIDIVEPSLDDTTKILMGL 364
           DA+N++KP L  G++R IGSTTY+E++  F + R L RRFQ+IDI EP +++T  I+ GL
Sbjct: 296 DASNMLKPYLEGGEIRFIGSTTYEEFNRYFSRSRGLVRRFQQIDIQEPGIEETIHIVEGL 355

Query: 365 KTKYEAHHDVRYTNKALRAAVELSAKYINERHLPDKAIDVIDEAGARARLMPASRRKKTV 424
           K KYE  H V Y    +  AV  +A+YI++R LPDKAID++DEAGA   + P    K+TV
Sbjct: 356 KEKYETFHGVIYEEGVIAYAVTAAARYISDRFLPDKAIDLVDEAGAYREIHPTDTEKQTV 415

Query: 425 GVAEIESMVAKMARIPEKSVSSSDKDILKNLDQKMKMLVFGQDAAIDVLTEAIKLTRAGL 484
             A I  ++A++ ++   ++   D   L+ L +++   ++GQ+ A+  + EA+++ +AGL
Sbjct: 416 DKALITDILARICKVDVLAMKEEDNATLETLHERISAKIYGQEEAVCQVVEAVQMAKAGL 475

Query: 485 GAEHKPVGSFLFAGPTGVGKTEVTLQLSKLLGIELLRFDMSEYGERHSVSRLIGAPPGYV 544
             E+KP+ S LF GPTGVGKTEV   L+  LGI L RFDMSEY E+H+V++LIG+P GYV
Sbjct: 476 LDENKPLASLLFVGPTGVGKTEVAKVLASELGIALQRFDMSEYTEKHTVAKLIGSPAGYV 535

Query: 545 GYDQGGLLTDAVIKHPHSVVLLDEIEKAHPDIFNLLLQVMDNGTLTDNNGRKADFRNVIL 604
           GY+ GGLLTDA+ K P+ V+LLDEIEKAHPD+FN+LLQVMD   LTDN GRKAD R+VIL
Sbjct: 536 GYEDGGLLTDAIRKTPNCVLLLDEIEKAHPDVFNILLQVMDYAVLTDNKGRKADCRHVIL 595

Query: 605 VMTTNAGVAETVKKSIGLIQQDNSHDAM-SEIKKVFTPEFRNRLDHIIWFNSLDERVIHQ 663
           +MT+NAG     + SIG   Q  + +AM  ++KK F PEF NRL   + F+ +D  +   
Sbjct: 596 IMTSNAGAQFAHQASIGFGGQVAAGEAMLKQVKKTFKPEFINRLSATVVFHDMDYGMASL 655

Query: 664 VVDKFIVELQAQLDARGVSLEVSEDARHWLAVKGYDREMGARPMGRVIQEQLKKPLANEL 723
           +++K + EL+ +L AR V +E+S +A   L   G+ +E GAR M R I   LK  L  E+
Sbjct: 656 ILNKKLGELRNKLSARHVEMELSLEAYKHLLKLGFTKEYGAREMDRAIASHLKPLLMREI 715

Query: 724 LFGSLVDGGTVKVTLSDDRLAFE 746
           LFG+L  GG V+VT  + +L+ +
Sbjct: 716 LFGTLKTGGKVEVTAENGQLSLQ 738