Pairwise Alignments

Query, 756 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Vibrio cholerae E7946 ATCC 55056

Subject, 858 a.a., Heat shock protein F84.1 from Alteromonas macleodii MIT1002

 Score =  287 bits (734), Expect = 2e-81
 Identities = 162/418 (38%), Positives = 246/418 (58%), Gaps = 21/418 (5%)

Query: 5   ELESSLNGAFARARDKRHEFMTVEHLLLALLENDAAREALLACQADIDVLRRELDTFIDQ 64
           + + +++ A + A  + H+++   HL+ A+L         L  QA+I+V    L + + Q
Sbjct: 9   KFQLAISDAQSLALGRDHQYIEPVHLMTAMLNQQGGSVRPLLDQANINV--NALRSALSQ 66

Query: 65  TTPLIPKNDETRETQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESHAAYLL 124
               +P+ +             +L      +    + E   + + V    + +     +L
Sbjct: 67  AIERLPRIEGIGGDVQLSKDSGILLNLCDKIAQQRKDEYITSEIFVLAALQDKGRLGEIL 126

Query: 125 KKNDISRLDIVNFISHGITKASNHSEDSSSDSFGSSDTSEEVSADER--LESFATNLNQL 182
           K  +I++  I               E +  D  G    ++  + D R  LE + T+L + 
Sbjct: 127 KSLNITKEAI---------------ESAIDDMRGGQKVTDPNAEDVRQALEKYTTDLTER 171

Query: 183 AKQGQIDPLIGRDKELERTIQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRIVEGNVPEV 242
           A+QG++DP+IGRD E+ RT+QVL RR KNNP+L+GE GVGKTAI EGLA RI+ G VPE 
Sbjct: 172 AEQGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEG 231

Query: 243 IQRSVIYSLDIGSLLAGTKYRGDFEKRFKSILKQLEKEKD-AILFIDEIHTIIGAGAASG 301
           ++   + +LD+G+L+AG KYRG+FE+R K++L +L KE+   ILF+DE+HT++GAG   G
Sbjct: 232 LKNKRVLALDMGALVAGAKYRGEFEERLKAVLNELAKEEGRVILFVDELHTMVGAGKGDG 291

Query: 302 GQVDAANLIKPLLSSGKLRCIGSTTYQEYSNIFEKERALSRRFQKIDIVEPSLDDTTKIL 361
             +DA N++KP L+ G+L C+G+TT  EY    EK+ AL RRFQK+ + EPS++DT  IL
Sbjct: 292 A-MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVEEPSVEDTIAIL 350

Query: 362 MGLKTKYEAHHDVRYTNKALRAAVELSAKYINERHLPDKAIDVIDEAGARARLMPASR 419
            GLK +YE HH V  T+ A+ AA  LS +YI++R LPDKAID+IDEA +  RL   S+
Sbjct: 351 RGLKERYELHHSVDITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRLQIDSK 408



 Score =  260 bits (664), Expect = 2e-73
 Identities = 136/326 (41%), Positives = 204/326 (62%), Gaps = 3/326 (0%)

Query: 421 KKTVGVAEIESMVAKMARIPEKSVSSSDKDILKNLDQKMKMLVFGQDAAIDVLTEAIKLT 480
           K  V   EI  ++++   IP   +   +++ L  ++  +   V GQ+ A++ ++ AI+ +
Sbjct: 528 KNKVTDVEIADVLSRWTGIPVARMLEGEREKLLRMEDVLHKRVVGQEEAVEAVSNAIRRS 587

Query: 481 RAGLGAEHKPVGSFLFAGPTGVGKTEVTLQLSKLL---GIELLRFDMSEYGERHSVSRLI 537
           RAGL   ++P+GSFLF GPTGVGKTE+   L+  +      ++R DMSE+ E+HSV+RL+
Sbjct: 588 RAGLADPNRPIGSFLFLGPTGVGKTELCKALAGFMFDTEDAMVRIDMSEFMEKHSVARLV 647

Query: 538 GAPPGYVGYDQGGLLTDAVIKHPHSVVLLDEIEKAHPDIFNLLLQVMDNGTLTDNNGRKA 597
           GAPPGYVGY++GG LT+AV + P+SV+LLDE+EKAHPD+FN+LLQV+D+G LTD  GR  
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTV 707

Query: 598 DFRNVILVMTTNAGVAETVKKSIGLIQQDNSHDAMSEIKKVFTPEFRNRLDHIIWFNSLD 657
           DF+N +++MT+N G      K       D     MS + + F PEF NR+D I+ F+ L 
Sbjct: 708 DFKNTVVIMTSNLGSDIIQDKHNESQYDDMKASVMSVVGQHFRPEFINRVDDIVVFHPLG 767

Query: 658 ERVIHQVVDKFIVELQAQLDARGVSLEVSEDARHWLAVKGYDREMGARPMGRVIQEQLKK 717
           +  I  +    +  L+A+L  +G  L +S  A   LA  G+D   GARP+ R IQ Q++ 
Sbjct: 768 KEQIKSIAKIQLASLRARLAEKGYKLTLSAAAMDKLADAGFDPVFGARPLKRAIQVQVEN 827

Query: 718 PLANELLFGSLVDGGTVKVTLSDDRL 743
           PLA++LL G L+   T+++   D  L
Sbjct: 828 PLAHQLLAGELIPESTIRIDADDSGL 853