Pairwise Alignments

Query, 756 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Vibrio cholerae E7946 ATCC 55056

Subject, 836 a.a., ATP-dependent Clp protease, ATP-binding subunit from Agrobacterium fabrum C58

 Score =  870 bits (2249), Expect = 0.0
 Identities = 439/747 (58%), Positives = 570/747 (76%), Gaps = 16/747 (2%)

Query: 6   LESSLNGAFARARDKRHEFMTVEHLLLALLENDAAREALLACQADIDVLRRELDTFID-Q 64
           LE +L+ A   A ++ HE+ T+EHLLLAL+++  A   + AC  D+D LR+ +  ++D +
Sbjct: 8   LEKALHQALTFANERHHEYATLEHLLLALIDDADAAAVMAACNVDLDALRKTVSDYVDNE 67

Query: 65  TTPLIPKNDETRETQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESHAAYLL 124
            T L+   DE  +++PT  FQRV+QRAV HVQSSGR EVTGANVLVAIF+E+ESHAAY L
Sbjct: 68  LTNLVTGYDE--DSKPTSGFQRVIQRAVIHVQSSGREEVTGANVLVAIFAERESHAAYFL 125

Query: 125 KKNDISRLDIVNFISHGI--------TKASNHSEDSSSDSFGSSDTSEEVSADER----- 171
           ++ +++R D VN+ISHGI        T+A   +++  S+S  S    EE  +  +     
Sbjct: 126 QEQEMTRYDAVNYISHGIGKRPGTSQTRAPRGADEPESESKPSRGNPEEDGSSAKKQQDA 185

Query: 172 LESFATNLNQLAKQGQIDPLIGRDKELERTIQVLCRRRKNNPLLVGEAGVGKTAIAEGLA 231
           L+++  NLN  A+ G+IDPLIGR  E+ RTIQ+LCRR KNNPL VG+ GVGKTAIAEGLA
Sbjct: 186 LKAYCVNLNDKARNGKIDPLIGRHDEVNRTIQILCRRSKNNPLYVGDPGVGKTAIAEGLA 245

Query: 232 WRIVEGNVPEVIQRSVIYSLDIGSLLAGTKYRGDFEKRFKSILKQLEKEKDAILFIDEIH 291
            RIVEG VPE +    I+SLD+G+LLAGT+YRGDFE+R K ++K+LE+   A+LFIDEIH
Sbjct: 246 KRIVEGKVPEALANDTIFSLDMGTLLAGTRYRGDFEERLKQVVKELEEFPGAVLFIDEIH 305

Query: 292 TIIGAGAASGGQVDAANLIKPLLSSGKLRCIGSTTYQEYSNIFEKERALSRRFQKIDIVE 351
           T+IGAGA SGG +DA+NL+KP LSSG +RCIGSTTY+EY   FEK+RAL RRFQKID+ E
Sbjct: 306 TVIGAGATSGGAMDASNLLKPALSSGAIRCIGSTTYKEYRQFFEKDRALVRRFQKIDVNE 365

Query: 352 PSLDDTTKILMGLKTKYEAHHDVRYTNKALRAAVELSAKYINERHLPDKAIDVIDEAGAR 411
           PS+DD   I+ GLK  +E +H +RY+N+A++AAVELSA+YI++R LPDKAIDVIDE GA 
Sbjct: 366 PSIDDAIAIMKGLKPYFEDYHHLRYSNEAIKAAVELSARYISDRKLPDKAIDVIDETGAA 425

Query: 412 ARLMPASRRKKTVGVAEIESMVAKMARIPEKSVSSSDKDILKNLDQKMKMLVFGQDAAID 471
             L+PAS+R+K +   EIE+ +A MARIP K+VS  D+ +L NL+++++ +V+GQD AI+
Sbjct: 426 QMLLPASKRRKLITEREIEATIATMARIPPKTVSKDDEMVLANLEKELRSVVYGQDIAIE 485

Query: 472 VLTEAIKLTRAGLGAEHKPVGSFLFAGPTGVGKTEVTLQLSKLLGIELLRFDMSEYGERH 531
            L  AIKL RAGL   +KP+GS++F+GPTGVGKTEV  QL+  LG+E+LRFDMSEY ERH
Sbjct: 486 ALATAIKLARAGLREPNKPIGSYVFSGPTGVGKTEVAKQLAASLGVEMLRFDMSEYMERH 545

Query: 532 SVSRLIGAPPGYVGYDQGGLLTDAVIKHPHSVVLLDEIEKAHPDIFNLLLQVMDNGTLTD 591
           +VSRL+GAPPGYVG+DQGGLLTD V +HPHSVVLLDEIEKAHPDI+N+LLQVMD+G+LTD
Sbjct: 546 TVSRLLGAPPGYVGFDQGGLLTDGVDQHPHSVVLLDEIEKAHPDIYNILLQVMDHGSLTD 605

Query: 592 NNGRKADFRNVILVMTTNAGVAETVKKSIGLIQQDNSHDAMSEIKKVFTPEFRNRLDHII 651
           +NG+K DFRNVIL+MTTNAG +E  K +IG      + +    I ++FTPEFRNRLD II
Sbjct: 606 HNGKKIDFRNVILIMTTNAGASEMAKSAIGFGSSRRTGEDEEAINRLFTPEFRNRLDAII 665

Query: 652 WFNSLDERVIHQVVDKFIVELQAQLDARGVSLEVSEDARHWLAVKGYDREMGARPMGRVI 711
            F+ L   VIH+VV KF+++L+ QL  R V+ ++ EDA  WLA KGYD +MGARP+ RVI
Sbjct: 666 PFSPLPTAVIHKVVQKFVMQLETQLSERNVTFDLHEDAISWLAEKGYDEKMGARPLSRVI 725

Query: 712 QEQLKKPLANELLFGSLVDGGTVKVTL 738
           QE +KKPLANE+LFG L  GG V VT+
Sbjct: 726 QEHIKKPLANEILFGKLKKGGVVSVTV 752