Pairwise Alignments

Query, 76 a.a., cold-shock protein CspD from Vibrio cholerae E7946 ATCC 55056

Subject, 93 a.a., Cold shock-like protein CspD from Pseudomonas sp. DMC3

 Score = 94.4 bits (233), Expect = 2e-25
 Identities = 45/79 (56%), Positives = 55/79 (69%), Gaps = 8/79 (10%)

Query: 4  MATGTVKWFNNAKGFGFICPE--------GEDGDIFAHYSTIQMDGYRTLKAGQQVSYQV 55
          MA G VKWFNNAKGFGFI  +        G+D D FAHYS I+M+GY+TLKAGQ V++ +
Sbjct: 1  MAVGKVKWFNNAKGFGFINTDAREGRDEDGKDIDFFAHYSAIEMEGYKTLKAGQAVTFDI 60

Query: 56 EQGPKGYHASCVVPIEGQS 74
           QGPKG HA  + P+E  S
Sbjct: 61 VQGPKGLHAVKITPVEAAS 79