Pairwise Alignments

Query, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

Subject, 257 a.a., rRNA pseudouridine synthase from Rhodanobacter sp000427505 FW510-R12

 Score =  102 bits (255), Expect = 6e-27
 Identities = 66/187 (35%), Positives = 95/187 (50%), Gaps = 17/187 (9%)

Query: 57  RPLSPAERKVILFNKPYDTLSQFTDGDGRKTLADYIPIKDVY---AAGRLDRDSEGLLIL 113
           +P+  A+   + FNKP   +    D  GR T+   +    +      GRLD+ SEGLL+L
Sbjct: 73  QPVKSAKCVYVAFNKPRGLVVSAADEHGRATVYTTLAAAGLPWLGPVGRLDKASEGLLLL 132

Query: 114 TNDGILQARLTQPQSKAPKTYWVQVEGSPQESDLEALRHGVTLKDGPTLPAKVDIMPEPT 173
           +ND +  A +T P +   KTY VQV G P  + L A+  G+    G  L A+   +    
Sbjct: 133 SNDTVWAAGITNPATHLDKTYHVQVSGLPDTAVLAAMLAGID-DAGDLLKARRVAL---- 187

Query: 174 LWPRNPPVRFRAAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMGDWNLGDLQP 233
                     R      WL + L EGRNR +RR+ A +GF  LRLIR S+G   LG+L  
Sbjct: 188 ---------LRTGEKNAWLEMVLDEGRNRHIRRLLAALGFDVLRLIRVSIGPLALGELAK 238

Query: 234 GEWREVT 240
           G+WR+++
Sbjct: 239 GQWRQLS 245