Pairwise Alignments

Query, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

Subject, 177 a.a., pseudouridine synthase from Rhodanobacter sp000427505 FW510-R12

 Score =  216 bits (549), Expect = 3e-61
 Identities = 108/175 (61%), Positives = 132/175 (75%), Gaps = 1/175 (0%)

Query: 66  VILFNKPYDTLSQFTDGDGRKTLADYIPIKDVYAAGRLDRDSEGLLILTNDGILQARLTQ 125
           ++  NKPY  L QFTD  GR TLAD++  KDVYAAGRLD+DSEGLL+LT+DG L  RLT 
Sbjct: 2   LLALNKPYGVLCQFTDELGRATLADFVMQKDVYAAGRLDQDSEGLLLLTDDGRLAHRLTD 61

Query: 126 PQSKAPKTYWVQVEGSPQESDLEALRHGVTLKDGPTLPAKVDIMPEPT-LWPRNPPVRFR 184
           P+ K  KTY  QVEG+  E+ L++LR GV L DGPTLPA+     +P  LWPR+PPVRFR
Sbjct: 62  PRHKQAKTYLAQVEGTIDEATLQSLRRGVVLNDGPTLPAEAAFAAKPDWLWPRDPPVRFR 121

Query: 185 AAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMGDWNLGDLQPGEWREV 239
            +IPT+WL++TL EGRNRQVRRMTA +GFPTLRLIR  +G++ L  L PGE R +
Sbjct: 122 QSIPTSWLSLTLREGRNRQVRRMTAAVGFPTLRLIRVRIGEYALDGLAPGETRHI 176