Pairwise Alignments

Query, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 90.9 bits (224), Expect = 5e-23
 Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 17/185 (9%)

Query: 58  PLSPAER-KVILFNKPYDTLSQFTDGDGRKTLADYIP--IKDVYAAGRLDRDSEGLLILT 114
           PL   ER ++ L++KP   ++   D +GR TL + +P  +  + + GRLD +SEGLL+LT
Sbjct: 82  PLPERERTRLFLYHKPKGVVTTNRDPEGRTTLFEILPKGLPRLVSVGRLDLNSEGLLLLT 141

Query: 115 NDGILQARLTQPQSKAPKTYWVQVEGSPQESDLEALRHGVTLKDGPTLPAKVDIMPEPTL 174
           NDG L   L  P++   + Y V+  G   ++ L+ L  G+T+      P + ++      
Sbjct: 142 NDGGLARVLELPETGWLRRYRVRANGEIDQAKLDTLIKGITVDGVEYGPIEAEL------ 195

Query: 175 WPRNPPVRFRAAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMGDWNLGDLQPG 234
                    R      W+ ++L EG+NR++R +   +G    RLIR S G + LG++  G
Sbjct: 196 --------DRVQGANAWITVSLREGKNREIRNVFGALGLAVNRLIRVSYGPFQLGEIPEG 247

Query: 235 EWREV 239
              EV
Sbjct: 248 SVEEV 252