Pairwise Alignments

Query, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

Subject, 231 a.a., 16S rRNA pseudouridine(516) synthase from Vibrio cholerae E7946 ATCC 55056

 Score = 84.7 bits (208), Expect = 1e-21
 Identities = 59/181 (32%), Positives = 94/181 (51%), Gaps = 23/181 (12%)

Query: 65  KVILFNKPYDTLSQFTDGDGRK--TLADYIPIKDVYAAGRLDRDSEGLLILTNDGILQAR 122
           + I+ +KP   +    DG  +   TL D + I+D++ AGRLD D+ GLL++T+DG    R
Sbjct: 60  RYIMMHKPDGVVCSHEDGFNQTALTLLDEVNIQDLHFAGRLDVDTTGLLLITDDGQWSHR 119

Query: 123 LTQPQSKAPKTYWVQVEGSPQESDLEALRHGVTLKDGP--TLPAKVDIMPEPTLWPRNPP 180
           +T P+ K  KTY V +    Q    E    G+ L+     TLPA+++++ E         
Sbjct: 120 VTSPKHKCEKTYRVWLADPIQADYAEQFNRGIELRGERELTLPAQLEVISE--------- 170

Query: 181 VRFRAAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMGDWNLGD-LQPGEWREV 239
                    T + +T+ EG+  QV+RM A +G   + L R  +G   L + L+PGE+R +
Sbjct: 171 ---------TEVLLTIHEGKYHQVKRMFAALGNKVIGLHRERIGQITLDETLEPGEYRYL 221

Query: 240 T 240
           T
Sbjct: 222 T 222