Pairwise Alignments

Query, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) from Sphingobium sp. HT1-2

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 59/182 (32%), Positives = 89/182 (48%), Gaps = 16/182 (8%)

Query: 60  SPAERKVILFNKPYDTLSQFTDGDGRKTLADYIP--IKDVYAAGRLDRDSEGLLILTNDG 117
           +PA  ++ LF+KP   L+   D  GR T+ D +P  +  +   GRLD ++EGLL+LT DG
Sbjct: 271 APAPARLFLFHKPTGFLTTERDPAGRPTIYDILPDDLPRLMPIGRLDMNTEGLLLLTTDG 330

Query: 118 ILQARLTQPQSKAPKTYWVQVEGSPQESDLEALRHGVTLKDGPTLPAKVDIMPEPTLWPR 177
             +  +  P +  P+TY  +  G   +  LE L  G+ +      P + ++         
Sbjct: 331 EFKREMELPATGVPRTYRARAFGEVSQQQLEDLFDGIEIDGIQYGPIEANLE-------- 382

Query: 178 NPPVRFRAAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMGDWNLGDLQPGEWR 237
                 R      W+ +TL EG+NR+VRR+  H      RLIR S G + LG+L  G   
Sbjct: 383 ------RRTGRNQWIEMTLTEGKNREVRRVLEHFELKVNRLIRTSYGPFELGELAGGAVE 436

Query: 238 EV 239
           EV
Sbjct: 437 EV 438