Pairwise Alignments

Query, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

Subject, 609 a.a., pseudouridine synthase from Paraburkholderia sabiae LMG 24235

 Score = 89.7 bits (221), Expect = 1e-22
 Identities = 65/189 (34%), Positives = 91/189 (48%), Gaps = 20/189 (10%)

Query: 56  KRPLSPAERKVILFNKPYDTLSQFTDGDGRKTLADYIPIKDV---YAAGRLDRDSEGLLI 112
           KR L+    +V+L++KP   +    D +GR ++ D +P        A GRLD ++EGLL+
Sbjct: 259 KRKLASKPPRVLLYHKPTGEIVSHADPEGRPSVFDKLPPMKTAKWLAVGRLDFNTEGLLM 318

Query: 113 LTNDGILQARLTQPQSKAPKTYWVQVEGSPQESDLEALRHGVTLKDGPTLPAKV-DIMPE 171
           LT  G L  R   P+    + Y V+V G   E + + L HGV L+DGP    ++ D   E
Sbjct: 319 LTTSGDLANRFMHPRYSVEREYAVRVVGELAEGNRQKLLHGVELEDGPANFLRIRDGGGE 378

Query: 172 PTLWPRNPPVRFRAAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMGDWNL-GD 230
            T                 W  + L EGRNR+VRRM   +G    RLIR   G   L   
Sbjct: 379 GT---------------NHWYHVALAEGRNREVRRMFEAVGLMVSRLIRTRHGPIALPRG 423

Query: 231 LQPGEWREV 239
           L+ G W E+
Sbjct: 424 LKRGRWEEL 432