Pairwise Alignments

Query, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

Subject, 189 a.a., pseudouridine synthase from Paraburkholderia sabiae LMG 24235

 Score =  188 bits (478), Expect = 6e-53
 Identities = 94/179 (52%), Positives = 127/179 (70%), Gaps = 5/179 (2%)

Query: 66  VILFNKPYDTLSQFTDGDGRKTLADYIPIKDVYAAGRLDRDSEGLLILTNDGILQARLTQ 125
           ++  NKP+ T+ QF+  + R +LAD++ +  VY AGRLD DSEGLL+LT+DG LQ R+ +
Sbjct: 3   LLALNKPFGTICQFSPHETRASLADWVKVPGVYPAGRLDSDSEGLLLLTDDGALQTRIAE 62

Query: 126 PQSKAPKTYWVQVEGSPQESDLEALRHGVTLKDGPTLPAKVD-IMPEPTLWPRNPPVRFR 184
           P+ K  K YW QVEG+P E  L+AL  GV L D  T P + D + P   LW R PP+R+R
Sbjct: 63  PKHKLVKRYWAQVEGAPTEQHLKALTRGVDLGDYVTRPCRADFVEPGDALWDRTPPIRYR 122

Query: 185 AAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMGD---WNLGDLQPGEWREVT 240
           AAIPTTW+ +++ EG+NRQVRRMTA +GFPTLRL+R  +G    ++LG LQPGE  E++
Sbjct: 123 AAIPTTWIELSITEGKNRQVRRMTAAVGFPTLRLVRVGVGALDIFSLG-LQPGESLELS 180