Pairwise Alignments

Query, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., rRNA pseudouridine synthase from Magnetospirillum magneticum AMB-1

 Score =  103 bits (256), Expect = 6e-27
 Identities = 67/188 (35%), Positives = 103/188 (54%), Gaps = 23/188 (12%)

Query: 58  PLS-PAERKVILFNKPYDTLSQFTDGDGRKTLADYIP--IKDVYAAGRLDRDSEGLLILT 114
           PLS P + ++  ++KP   ++   D +GR T+ D++P  +  V + GRLD +SEGLL+LT
Sbjct: 104 PLSEPEKTRLWRYHKPAGLVTTHKDPEGRPTVFDHLPEGMPRVISVGRLDLNSEGLLLLT 163

Query: 115 NDGILQARLTQPQSKAPKTYWVQVEGSPQESDLEALRHGVTLKD---GPTLPAKVDIMPE 171
           NDG L  +L  P +   + Y V+V G   E  L  L +G+T+     GP + A +D    
Sbjct: 164 NDGELARKLELPSNAWLRRYRVRVHGEVSEDALARLENGITIDGMAYGP-ISATLD---- 218

Query: 172 PTLWPRNPPVRFRAAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMGDWNLGDL 231
                       R      WL+++L EG+NR++RR+  ++G+P  RLIR S G + LG L
Sbjct: 219 ------------RRQGANAWLSVSLREGKNREIRRVMEYLGWPVSRLIRVSYGPFQLGTL 266

Query: 232 QPGEWREV 239
           + G   EV
Sbjct: 267 EEGAADEV 274