Pairwise Alignments

Query, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

Subject, 182 a.a., pseudouridine synthase from Magnetospirillum magneticum AMB-1

 Score =  245 bits (626), Expect = 4e-70
 Identities = 117/179 (65%), Positives = 144/179 (80%), Gaps = 2/179 (1%)

Query: 65  KVILFNKPYDTLSQFTDGDG-RKTLADYIPIKDVYAAGRLDRDSEGLLILTNDGILQARL 123
           ++I+FNKPYD L+QFTD +G R TL D+I +  VYAAGRLDRDSEGLL+LT+ G L AR+
Sbjct: 3   RLIVFNKPYDVLTQFTDREGGRATLKDFIKVPGVYAAGRLDRDSEGLLVLTDSGPLAARI 62

Query: 124 TQPQSKAPKTYWVQVEGSPQESDLEALRHGVTLKDGPTLPAKVDIMPEP-TLWPRNPPVR 182
           + P+ K  KTYW QVEG P E+DL+ LR G+ LKDGPTLPA    M EP  LWPR+PP+R
Sbjct: 63  SDPKHKLAKTYWAQVEGVPTEADLDRLRRGIVLKDGPTLPAGARAMAEPDNLWPRDPPIR 122

Query: 183 FRAAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMGDWNLGDLQPGEWREVTL 241
           +RAAIPT+W+ +TL EGRNRQVRRMTA +GFPTLRLIR+++G+WNL  L PGEWR+V L
Sbjct: 123 YRAAIPTSWIELTLREGRNRQVRRMTAAMGFPTLRLIRWAVGEWNLEGLAPGEWRDVRL 181