Pairwise Alignments

Query, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., 23S rRNA pseudouridine synthase (NCBI) from Escherichia coli BW25113

 Score = 82.4 bits (202), Expect = 9e-21
 Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 20/184 (10%)

Query: 58  PLSPAERKVILFNKPYDTLSQFTDGDGRKTLADYIP-IKDVYAAGRLDRDSEGLLILTND 116
           P    +  +I  NKP   +S   DG+ R  + D++   K V+  GRLD+DS+GL+ LTN 
Sbjct: 61  PREAEDLVLIALNKPVGIVSTTEDGE-RDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNH 119

Query: 117 GILQARLTQPQSKAPKTYWVQVEGSPQESDLEALRHGVTLKDGPTLPAKVDIMPEPTLWP 176
           G L  ++ +  +   K Y V V+    E  +  +  GV +    T   KV          
Sbjct: 120 GDLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVK--------- 170

Query: 177 RNPPVRFRAAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMGDWNLGDLQPGEW 236
           +  P  FR         ITL++G NRQ+RRM  H G+   +L R  + + +L  +  GEW
Sbjct: 171 KEAPFVFR---------ITLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEW 221

Query: 237 REVT 240
           R++T
Sbjct: 222 RDLT 225